NONHSAT015514
Revision as of 20:15, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015514 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
353 nt |
Genomic location |
chr10+:91222149..91227834 |
Exon number |
2 |
Exons |
91222149..91222449,91227783..91227834 |
Genome context |
|
Sequence |
000001 GTGTGCAGAT GGTAACAAGG AAACAGCCAG CCACAATCAT CCAGCCCCAG CCTCCATCTG GAGGGGAGGT AGACCGAGCT 000080
000081 CTATTTACTT TTGCCATGGT TTTTCTTTTT TCTTCTTTTC CAGGTTGCTC CAACAGCCAA GTTATGATCT TGGAAGAGTT 000160 000161 TGCTGTCCAG TGACTTCCTG ATGGCATTCA AGGTTGGCAT AGAACGCTAC CTGGCCCATG GGTTACTCGC CATCTAAAAC 000240 000241 CAAAAATCAG GACATATTTA TATCTTATTG CTATGTCCAA AGGTTGATTT TTCTTCACTT GGTGAGCATC TTCTGTTTGG 000320 000321 CATTTCCACA TGTAATAAGT TAAGAACTGA TTT |
Predicted Small Protein
Name | NONHSAT015514_smProtein_8:172 |
Length | 55 |
Molecular weight | 5949.851 |
Aromaticity | 0.111111111111 |
Instability index | 55.4888888889 |
Isoelectric point | 4.86773681641 |
Runs | 8 |
Runs residual | 0.0145438121048 |
Runs probability | 0.0582604663487 |
Amino acid sequence | MVTRKQPATIIQPQPPSGGEVDRALFTFAMVFLFSSFPGCSNSQVMILEEFAVQ |
Secondary structure | LLLLLLLEEEELLLLLLLLHHHHHHHHHHHHHHHLLLLLLLLLLEEEHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooo |