NONHSAT015789

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT015789

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1097 nt

Genomic location

chr10+:97842793..97843889

Exon number

1

Exons

97842793..97843889

Genome context

Sequence
000001 GAAGCAGAGA AGACAGCTGT TTTGAAACGC AGGCTAAATA AGTGGTTAAA TGCACATTTT CTAAGGGCAA ACTTCTAGGG 000080
000081 TTTATACCCT ACTACAGTAG ACAGAAAATt gagctttact ttcctcacgc acaaaatgga gataacagcg ccattgagaa 000160
000161 tattaaagga gacaaaccag gtaaactcag aagagtgtct ggaatacaat aagcactcag tttatgttag ctattattat 000240
000241 AATTTCTGAC CTAGGGTTGT GTTTTACTCG GTAGGTCTAA CAGAGGGAAA AGGGTGCAAG AGTGTAATGG TTGAAGTGAT 000320
000321 GGAAGCTGAC TGGGAGAGAG AACAGCcaag ggattggagt tcttgaagct gaagtacaga tgcactggaa gtcattcagc 000400
000401 taaaaagcta gaaaaatggg caaagagcag aagagttttt taagttttta agggtgtagc tgctgacata aataattata 000480
000481 agattcagag actgggtggc ttcatgaaaa ggtaaaggtc actaaatttg aggtcaagca gttgagagcc aggatattgg 000560
000561 tttagttaac cacatggaat ttgaagtgac cgtcataaag gtgggacttg gggagaagag ggtaactata agccaggtgc 000640
000641 caaagtcttc agtgaatgaa atgaaatgaa tgggaATGGC AGGGACAGGA AGTTCAGAAA ATAATAAAGT CATATTGTAT 000720
000721 AAGCACATCT AAAGAAGGAT GCCAGCTGCT CTCCCCAGAT CCAACTGATG CTAGCTGGTG GGAAAAGACC ACAGACCCAA 000800
000801 GGCTGCTAAA TATCTTGCGA TGTTTAAGAG AGTATAATGA CAATACAGCA ACCTGACCTA TCCAAAATGT TACTACTGCT 000880
000881 CCTGCTGAGA AATACAGCCA TCAAACTGTT TAGAGTGCCT TCTCAAAGAA GCCTGGCTAT TTCACATGTC ATGGCATCTC 000960
000961 TGAAGCCCTT TCGAAGGATC ATTTGTGTCC TCTCTCTACC CCTACACATA CGTCCACCAC AGTATGGCTC ATACTTTATG 001040
001041 TATTTTTTTT TTGATTGATT GATTGATCGA CTGgagacaa ggtctcactc tgtcacc
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Predicted Small Protein

Name NONHSAT015789_smProtein_836:1057
Length 74
Molecular weight 8583.321
Aromaticity 0.123287671233
Instability index 61.2095890411
Isoelectric point 10.5999145508
Runs 9
Runs residual 0.0208572691118
Runs probability 0.0656342617126
Amino acid sequence MTIQQPDLSKMLLLLLLRNTAIKLFRVPSQRSLAISHVMASLKPFRRIICVLSLPLHIRP
PQYGSYFMYFFFD
Secondary structure LLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHLLLLEEEEEELLLLLLLL
LLLLLEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL
LLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooo
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