NONHSAT015789
Revision as of 20:16, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT015789 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1097 nt |
Genomic location |
chr10+:97842793..97843889 |
Exon number |
1 |
Exons |
97842793..97843889 |
Genome context |
|
Sequence |
000001 GAAGCAGAGA AGACAGCTGT TTTGAAACGC AGGCTAAATA AGTGGTTAAA TGCACATTTT CTAAGGGCAA ACTTCTAGGG 000080
000081 TTTATACCCT ACTACAGTAG ACAGAAAATt gagctttact ttcctcacgc acaaaatgga gataacagcg ccattgagaa 000160 000161 tattaaagga gacaaaccag gtaaactcag aagagtgtct ggaatacaat aagcactcag tttatgttag ctattattat 000240 000241 AATTTCTGAC CTAGGGTTGT GTTTTACTCG GTAGGTCTAA CAGAGGGAAA AGGGTGCAAG AGTGTAATGG TTGAAGTGAT 000320 000321 GGAAGCTGAC TGGGAGAGAG AACAGCcaag ggattggagt tcttgaagct gaagtacaga tgcactggaa gtcattcagc 000400 000401 taaaaagcta gaaaaatggg caaagagcag aagagttttt taagttttta agggtgtagc tgctgacata aataattata 000480 000481 agattcagag actgggtggc ttcatgaaaa ggtaaaggtc actaaatttg aggtcaagca gttgagagcc aggatattgg 000560 000561 tttagttaac cacatggaat ttgaagtgac cgtcataaag gtgggacttg gggagaagag ggtaactata agccaggtgc 000640 000641 caaagtcttc agtgaatgaa atgaaatgaa tgggaATGGC AGGGACAGGA AGTTCAGAAA ATAATAAAGT CATATTGTAT 000720 000721 AAGCACATCT AAAGAAGGAT GCCAGCTGCT CTCCCCAGAT CCAACTGATG CTAGCTGGTG GGAAAAGACC ACAGACCCAA 000800 000801 GGCTGCTAAA TATCTTGCGA TGTTTAAGAG AGTATAATGA CAATACAGCA ACCTGACCTA TCCAAAATGT TACTACTGCT 000880 000881 CCTGCTGAGA AATACAGCCA TCAAACTGTT TAGAGTGCCT TCTCAAAGAA GCCTGGCTAT TTCACATGTC ATGGCATCTC 000960 000961 TGAAGCCCTT TCGAAGGATC ATTTGTGTCC TCTCTCTACC CCTACACATA CGTCCACCAC AGTATGGCTC ATACTTTATG 001040 001041 TATTTTTTTT TTGATTGATT GATTGATCGA CTGgagacaa ggtctcactc tgtcacc |
Predicted Small Protein
Name | NONHSAT015789_smProtein_836:1057 |
Length | 74 |
Molecular weight | 8583.321 |
Aromaticity | 0.123287671233 |
Instability index | 61.2095890411 |
Isoelectric point | 10.5999145508 |
Runs | 9 |
Runs residual | 0.0208572691118 |
Runs probability | 0.0656342617126 |
Amino acid sequence | MTIQQPDLSKMLLLLLLRNTAIKLFRVPSQRSLAISHVMASLKPFRRIICVLSLPLHIRP PQYGSYFMYFFFD |
Secondary structure | LLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHLLLLEEEEEELLLLLLLL LLLLLEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL LLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooo ooooooooooooo |