NONHSAT016291
Revision as of 20:18, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT016291 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
722 nt |
Genomic location |
chr10-:109621324..109819042 |
Exon number |
5 |
Exons |
109621324..109621501,109790109..109790246,109790797..109790942,109792926..109793072,109818930..109819042 |
Genome context |
|
Sequence |
000001 CAGGGTATTC CAAAAAGAAA TAAGAAAGAT AACTTACTTT ATCATAGAGA ATGAGTTTTT AGACTGAATA TAATTTAAAA 000080
000081 GAGGATACTT GTAACACTGG AAATAGTGAA TTTCCACTAT CTAGGAGAGA TATATAAATG AATAATTTGG CGGGTTTTTC 000160 000161 AAGTGTATTT GTGGTGATTA TATTGCATTT GGCTCTTGTA TCTTCAGTAA AAGAAGCCTT GAAGCACTTC ACGTAAGCAT 000240 000241 TTTAGTTAAC TCTCTCCATA CCTGATCTCC CTGGCACAAA TTAGGCAATA CTCAACATTG ATTGCTATGA AATAAGGCTG 000320 000321 AAGTCCATTG CTCAAGTGCT GGGACGTGTG TGTGTGTGTG CATACATGTG TGCTCACATG TGCACGTTTG TGTGTGTGTA 000400 000401 CAATTTCTCC CATTCAGAGG ATTGTTTGTT TACTCTTTAG CTAGTATATT TTGATGCACA TTTAAAAAAG CATTTCATGA 000480 000481 AGGCCAATTT GTCTACTTTT TTTGTTGTCA TTATTGCCTG TATGTTTGGT GTCATATACA ATAAGGATGC AGTGATGTCC 000560 000561 ATTTTCTCCC ATGCCTGAGG GCCAAGGCTA GCTCTGTTTT GGAAAGTGAA GGTATATTAC TGGCCTAAAT CAAAATACCC 000640 000641 TCAGGCCCCA ATTTACAACA TTAGTGAAAT TAATCCTTCA TGTTTAATAA TAAGAGCATG TACTTTGGAG TCAAGCATGC 000720 000721 TG |
Predicted Small Protein
Name | NONHSAT016291_smProtein_476:577 |
Length | 34 |
Molecular weight | 3669.4018 |
Aromaticity | 0.151515151515 |
Instability index | 57.1212121212 |
Isoelectric point | 7.95709228516 |
Runs | 9 |
Runs residual | 0.0886034255599 |
Runs probability | 0.0464091542523 |
Amino acid sequence | MKANLSTFFVVIIACMFGVIYNKDAVMSIFSHA |
Secondary structure | LLLLHHHEEEEEHHHHHLEEELHHHHHHHHHLL |
PRMN | LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | iiiiiiTTTTTTTTTTTTTTTTTTooooooooo |