NONHSAT017168
Revision as of 20:22, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017168 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
774 nt |
Genomic location |
chr10-:135470739..135474139 |
Exon number |
8 |
Exons |
135470739..135470820,135470909..135470985,135471898..135472005,135472134..135472226,135472869..135472961,135473210..135473312,135473826..135473970,135474067..135474139 |
Genome context |
|
Sequence |
000001 GGCTTGGAAA TGGGCCCCAT CAACTGTGTG TCACCTGAGC ACATTCTCCC AGGGGTCCAG GAGGGGCCAT CGTAATCAAG 000080
000081 CTTGGACATG CCTGAAGCAT GTTCAGTGAC TAAAAGTGCC TACCATGAGC AGCTGGAACC CACTCCCTGA GAGCTTCAAG 000160 000161 ATGCATGGGT ACCTCATGTA CCTGTTTGTA ATTACAGCCA AGGACCAGCA GGCAGCATCA GAACCACCCA TTCATGAGGG 000240 000241 TCACCACCAC ATTGCAGGTG TGCAGCTGGA CGGCTCCCCA GGCAGAGCCT GCCATGGACT CCATGCACAC AGAGGATGCA 000320 000321 CAGCCGGGGC TGGAACAAGG ACCTGTGGAT AATGAGGGAA CTGCTCTGCA ATAACCGGCC TGAGCAGCTG CTTCAAGAAA 000400 000401 CAGCCACAAT CAAGCTGACC CGTGGAGCCA GGAGGTGATT TACAACATCT GCAAGGCAGT CAGCCCCATC AGCTCTATGC 000480 000481 CCTTCAACAT TCACTTCAAC TCAAACAGAT CCCTGAAGGA GGGCTGTGAG CTCATCAGGG AGACCCTGAG CCTGTGGAAC 000560 000561 ATGCCTGAGG CCAAGCCCAT GGGGATTTGT GTCTACTTGC ACCTCCTTGC TCATCGTCCC TGAGTAACCA ACACAAGGCA 000640 000641 GTGCTAATAA GCAGGGGAGT GATGGGCATC GGGAACCCCA ATACTATCCG GGGCCCTGTG CTGCTTCTCC AGCAGCCGGC 000720 000721 TGCCTATGGC CCTGAGCCTG TCACACCATG CTTGCTACCT CATGCTACTT GTGT |
Predicted Small Protein
Name | NONHSAT017168_smProtein_476:622 |
Length | 49 |
Molecular weight | 5608.5678 |
Aromaticity | 0.0833333333333 |
Instability index | 54.3791666667 |
Isoelectric point | 7.86749267578 |
Runs | 8 |
Runs residual | 0.00109649122807 |
Runs probability | 0.0488208797032 |
Amino acid sequence | MPFNIHFNSNRSLKEGCELIRETLSLWNMPEAKPMGICVYLHLLAHRP |
Secondary structure | LLLEEEELLLLLHHHHHHHHHHHHHHHLLLLLLLLLEEEHHHHHHLLL |
PRMN | - |
PiMo | - |