NONHSAT017310
Revision as of 20:23, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017310 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
568 nt |
Genomic location |
chr11+:747417..756284 |
Exon number |
2 |
Exons |
747417..747578,755879..756284 |
Genome context |
|
Sequence |
000001 ATTGTGGGCC GTccgcgcgc ccgtcccgtc gccgccgccg ccgccgcAGA CCCCTCGGTC TTGCTATGTC GAGCTCACCC 000080
000081 GTGAAGCGTC AGAGGATGGA GTCCGCGCTG GACCAGCTCA AGCAGTTCAC CACCGTGGTG GCCGACACGG GCGACTTCCA 000160 000161 CGCCATCGAC GAGTACAAGC CCCAGGATGC TACCACCAAC CCGTCCCTGA TCCTGGCCGC AGCACAGATG CCCGCTTACC 000240 000241 AGGAGCTGGT GGAGGAGGCG ATTGCCTATG GCCGGAAGCT GGGCGGGTGA GTGCCTGGAC TCGGGAGGGT CCCAGCTAGG 000320 000321 CCCTCGTGCT AGTCTAGTTG GCCTTGCTTC CCTCCCTAAC TGAATTTTAG TTCTCAAACA CCATGAACTC AAGGGGGGAA 000400 000401 AAAAACCCTA TCTTTTTGCC TATTTTTGtt tattgaagtg taatctgcat gaagtaacct gcacctgtgg taaatgagca 000480 000481 gttcagagag ttttgccaat gtgtgtaccc tgtaaatacc accccagtca agatgcagag cacttgcaga cccccacagg 000560 000561 cccctcct |
Predicted Small Protein
Name | NONHSAT017310_smProtein_65:289 |
Length | 75 |
Molecular weight | 8101.0343 |
Aromaticity | 0.0675675675676 |
Instability index | 56.3472972973 |
Isoelectric point | 4.87017822266 |
Runs | 10 |
Runs residual | 0.00751483190508 |
Runs probability | 0.0484190072426 |
Amino acid sequence | MSSSPVKRQRMESALDQLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQE LVEEAIAYGRKLGG |
Secondary structure | LLLLHHHHHHHHHHHHHHHHHEEEEELLLLEEEELLLLLLLLLLLHHHHHHHHHLHHHHH HHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |