NONHSAT017310

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT017310

Source

NONCODE4.0

Same with

,

Classification

sense

Length

568 nt

Genomic location

chr11+:747417..756284

Exon number

2

Exons

747417..747578,755879..756284

Genome context

Sequence
000001 ATTGTGGGCC GTccgcgcgc ccgtcccgtc gccgccgccg ccgccgcAGA CCCCTCGGTC TTGCTATGTC GAGCTCACCC 000080
000081 GTGAAGCGTC AGAGGATGGA GTCCGCGCTG GACCAGCTCA AGCAGTTCAC CACCGTGGTG GCCGACACGG GCGACTTCCA 000160
000161 CGCCATCGAC GAGTACAAGC CCCAGGATGC TACCACCAAC CCGTCCCTGA TCCTGGCCGC AGCACAGATG CCCGCTTACC 000240
000241 AGGAGCTGGT GGAGGAGGCG ATTGCCTATG GCCGGAAGCT GGGCGGGTGA GTGCCTGGAC TCGGGAGGGT CCCAGCTAGG 000320
000321 CCCTCGTGCT AGTCTAGTTG GCCTTGCTTC CCTCCCTAAC TGAATTTTAG TTCTCAAACA CCATGAACTC AAGGGGGGAA 000400
000401 AAAAACCCTA TCTTTTTGCC TATTTTTGtt tattgaagtg taatctgcat gaagtaacct gcacctgtgg taaatgagca 000480
000481 gttcagagag ttttgccaat gtgtgtaccc tgtaaatacc accccagtca agatgcagag cacttgcaga cccccacagg 000560
000561 cccctcct
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Predicted Small Protein

Name NONHSAT017310_smProtein_65:289
Length 75
Molecular weight 8101.0343
Aromaticity 0.0675675675676
Instability index 56.3472972973
Isoelectric point 4.87017822266
Runs 10
Runs residual 0.00751483190508
Runs probability 0.0484190072426
Amino acid sequence MSSSPVKRQRMESALDQLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQE
LVEEAIAYGRKLGG
Secondary structure LLLLHHHHHHHHHHHHHHHHHEEEEELLLLEEEELLLLLLLLLLLHHHHHHHHHLHHHHH
HHHHHHHHHHHLLL
PRMN -
PiMo -