NONHSAT018212
Revision as of 20:27, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018212 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
568 nt |
Genomic location |
chr11-:17098372..17099262 |
Exon number |
3 |
Exons |
17098372..17098793,17098976..17099024,17099166..17099262 |
Genome context |
|
Sequence |
000001 ACTTCCTGCG TGTTGGGTGG CTTCCTGCGG CGTTTCCACT CTCGCTCTCC TTTCGTTGCC TGATCGCCGC CATCATGGGT 000080
000081 CGCATGCATG CTCCCGGGAA GGGCCTGTCC CAGTCGGCTT TACCCTATCG ACGCAGCGTC CCCACTTGGT TGAAGTTGAC 000160 000161 ATCTGACGAC GTGAAGGAGC AGATTTACAA ACTGGCCAAG AAGGGCCTTA CTCCTTCACA GATCGGTGAG TGTTTGTGTC 000240 000241 TAACATAGCC TATTTCGCCT GTCCTCGTGT GACTTGTAGG ATCTAGTAGG TGGTAAAGTT ATTTTAAAAA TAGCCAAAAC 000320 000321 TCTGGTCTCG CCACCGTGCT AGaggcatca ttgtaagcac ttcacatgta ctgatttcgt ttaattctga ccacaatact 000400 000401 ttgaaataaa tcttcatggc tttcacccca gtttacagtt gaggaagcag aggcacactg ccgctggata ctaaccagcc 000480 000481 ccaaatcaca cagctgtcaa gtggaggagt tggaattggc taagcagAGT GCCTGACACA GTTCCTCACA GTTAGGTGTG 000560 000561 GTTTGAAT |
Predicted Small Protein
Name | NONHSAT018212_smProtein_74:247 |
Length | 58 |
Molecular weight | 6303.3611 |
Aromaticity | 0.0526315789474 |
Instability index | 69.2561403509 |
Isoelectric point | 9.62506103516 |
Runs | 7 |
Runs residual | 0.0311403508772 |
Runs probability | 0.0223206399677 |
Amino acid sequence | MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGECLCLT |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLEEELLHHHHHHHHHHHHHLLLLLLLLEEEELL |
PRMN | - |
PiMo | - |