NONHSAT018280
Revision as of 20:28, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018280 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
558 nt |
Genomic location |
chr11+:18373645..18380189 |
Exon number |
3 |
Exons |
18373645..18373993,18379499..18379589,18380072..18380189 |
Genome context |
|
Sequence |
000001 TTTAGGCTTC TCAGGAAGCA AAAATGATCA AACCCATGAC AATAAATGTG GATCTTTCTG CTGTTGCTTT CTTATTGCCC 000080
000081 TTATGGGAAT TAAATTATTT TATTGAAATC TCTTTACTTA TCGTTTCTTG CCTTGAGGGG AACTTAGTAC TGACTGCTAA 000160 000161 AATGTTGCAA AGACAAATGT TGAGCATCTT TACTGTGTGT GATTAGTAAT TTCTTCTGTG CTAACCTGCA GGTATTATCA 000240 000241 TGGTCCAACT CCAATCCAGT CACTACAGTA TGCAACAAGT CAGGACATTA TTAATTCTTT TCAAAGTATT AGACAAGAAA 000320 000321 TGGAAGCTTA TACACCCAAG TTAACTCAGG TTCTCTCAAG TAGTGCTGCC AGTAGTACCA TCACAGCACT GTCACCTGGA 000400 000401 GGGGCACTTA TGCAGGGAGG AACACAGCAA GCCATAAACC AGATGGTGCC AAATGATATT CAATCTGAAT TGAAACACTT 000480 000481 ATATGTAGCT GTTGGAGAAC TTCTACGACA TTTCTGGTCC TGCTTTCCTG TTAATACGCC ATTCCTAGAA GAAAAGGT |
Predicted Small Protein
Name | NONHSAT018280_smProtein_23:205 |
Length | 61 |
Molecular weight | 6817.231 |
Aromaticity | 0.0833333333333 |
Instability index | 43.71 |
Isoelectric point | 4.65008544922 |
Runs | 8 |
Runs residual | 0.0164007092199 |
Runs probability | 0.0187356474122 |
Amino acid sequence | MIKPMTINVDLSAVAFLLPLWELNYFIEISLLIVSCLEGNLVLTAKMLQRQMLSIFTVCD |
Secondary structure | LLLLLEELLLHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHHHHHHHHEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiii |