NONHSAT018325
Revision as of 20:28, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018325 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
742 nt |
Genomic location |
chr11-:19051244..19051985 |
Exon number |
1 |
Exons |
19051244..19051985 |
Genome context |
|
Sequence |
000001 AAACTAGCAT AGAGAGACTT CCTCTTTCCT GCTGCCAGAT TTTAGATTCC CTGCTGAAAC TCATCAGCTC CTTCCACCCC 000080
000081 ATCTCCATCT CCATCCCCTA CTTCTGTATC ACTATGATAA CTTATTTTTA CATTACGAGT CTAGGCATGC TCAGTGCCAT 000160 000161 TAGCACCAAG CACTGCAGTC CGTACTGTGG TGCATCTGGT ATACTGTTAC CACCACCTGA GACAGAAGTC AGCTGTCATA 000240 000241 TGTGGCATCT TGGTCCTGTC CCTGCTGCTG AGCATCCTTG AAAGGAACTA CTGTAGCTTC TTTTGGGGTA CTCTAATTTT 000320 000321 GCTTGGTTTC TGGCACTTTA TTTCATTACC ATGTGTTCTC TCTGGGTCCA GCCTGTCCCT ACTGGTCAGA CTCCTGTGTG 000400 000401 GCTGCAGGTG CTGCAGCTGA CCAGGCTCTT ATGTGACAAC CTGCTTCTGG TCCTAGTCTT CCACTTCTGC AGCCTACCTG 000480 000481 CTGGTGTTCA ATTGTTTCTT GGGTTGTGGG TTCAAATTGA CTACAATTCA TTCTTTTGTC TTGATTGCAT TGTGTTTATC 000560 000561 TTGACTTGCT AGCAGCTGCA CCAACCCTAT TATTTGCTTT CTTTGTTGGC TCCTTTAGGT AGTATCAATA TGGGAAGATC 000640 000641 CTCAAGCTGG TTCTCCAGAG GGCTCTGCAG GACACTGCTG AAGTATATGA AGGTGGAGGC AGACTTGTTC AGGAAACCCT 000720 000721 GAAGCTGTCG GGAAGCAGAC TG |
Predicted Small Protein
Name | NONHSAT018325_smProtein_350:571 |
Length | 74 |
Molecular weight | 8346.9955 |
Aromaticity | 0.13698630137 |
Instability index | 43.6123287671 |
Isoelectric point | 4.41229248047 |
Runs | 15 |
Runs residual | 0.0613345117101 |
Runs probability | 0.048271801213 |
Amino acid sequence | MCSLWVQPVPTGQTPVWLQVLQLTRLLCDNLLLVLVFHFCSLPAGVQLFLGLWVQIDYNS FFCLDCIVFILTC |
Secondary structure | LEEEEELLLLLLLLHHHHHHHHHHHHHHHLLLLEEEELLLLLLHHHHHHHLEEEEEELLL EEEELEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLL LLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTToooooo ooooooooooooo |