NONHSAT018430
Revision as of 20:28, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018430 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
775 nt |
Genomic location |
chr11-:23817463..23819005 |
Exon number |
2 |
Exons |
23817463..23817487,23818256..23819005 |
Genome context |
|
Sequence |
000001 gaacaggtgt caactattat tatcttggtt ttgaaattgg caaaatagca actctgagaa cttacatgac ttgatcaaag 000080
000081 tcatcaaatg atctgaagtt gcagCTGTTA TAGACCTCTT AGTTTTTTCA TTAATTTAAT GAGGGGACCA GTTAAGTAGG 000160 000161 GGACAGCAGA AAGAAAGGGG TATTTTTAAA ATGACTACTC ACCAGAATCC TGGTTTATAC AATATTACTT AATCTTAATG 000240 000241 ATCCTTCAGA TAAGAAAATT AGTTTTTTAG AAGTAGCCCA TGTTATCTAA GTTCTTGCAG CAGATAAAGA GAAAGAATCC 000320 000321 ATATTTGAAT CAAATGATCC CTATAACTCT TCCCATTTCC TTTGGACGGT TAATATTCAC TACTATAGCA GTTTGTCTTT 000400 000401 ATCTGCCAAG GGAACTAAAT AGAAACAGCA ACTATGTTTC AGCTATCTGG GCTTAAGAAT GTAAGAGAAG TAGGAGGCAA 000480 000481 TGGAATCCAT CAATATCAAA ATCAATTTAT TTATAATCCC TATGTCTAGA ATGGTAGCTT GCTTTAATTG TCCTAAATAT 000560 000561 TTTTCTGTGT CCTTTCAACT ATTATATAGC ACAGCTTGCA TCTTAAGGTT GACAGAGGAT CTTCTCTCCC CATTCCAGTT 000640 000641 TTACAGATGA ATAATCTATT GAAATGCTTC TCTGAGGGCC ACAAGCATAG ACAGAAATCT CACTATCAAG ATTCTTTTTG 000720 000721 CTCTTGGTAA AGGAGACTCC AAAGAAAAAA aaagagagag agagaagaaa gagaa |
Predicted Small Protein
Name | NONHSAT018430_smProtein_479:649 |
Length | 57 |
Molecular weight | 6617.8615 |
Aromaticity | 0.160714285714 |
Instability index | 72.61625 |
Isoelectric point | 8.58819580078 |
Runs | 8 |
Runs residual | 0.0104410616706 |
Runs probability | 0.0604243949832 |
Amino acid sequence | MESINIKINLFIIPMSRMVACFNCPKYFSVSFQLLYSTACILRLTEDLLSPFQFYR |
Secondary structure | LLLEEEEEEEEEELLLLEEEEELLLLEEEEEEEHHHHHHHHHHHHHHHLLLLLLLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiii |