NONHSAT018430

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT018430

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

775 nt

Genomic location

chr11-:23817463..23819005

Exon number

2

Exons

23817463..23817487,23818256..23819005

Genome context

Sequence
000001 gaacaggtgt caactattat tatcttggtt ttgaaattgg caaaatagca actctgagaa cttacatgac ttgatcaaag 000080
000081 tcatcaaatg atctgaagtt gcagCTGTTA TAGACCTCTT AGTTTTTTCA TTAATTTAAT GAGGGGACCA GTTAAGTAGG 000160
000161 GGACAGCAGA AAGAAAGGGG TATTTTTAAA ATGACTACTC ACCAGAATCC TGGTTTATAC AATATTACTT AATCTTAATG 000240
000241 ATCCTTCAGA TAAGAAAATT AGTTTTTTAG AAGTAGCCCA TGTTATCTAA GTTCTTGCAG CAGATAAAGA GAAAGAATCC 000320
000321 ATATTTGAAT CAAATGATCC CTATAACTCT TCCCATTTCC TTTGGACGGT TAATATTCAC TACTATAGCA GTTTGTCTTT 000400
000401 ATCTGCCAAG GGAACTAAAT AGAAACAGCA ACTATGTTTC AGCTATCTGG GCTTAAGAAT GTAAGAGAAG TAGGAGGCAA 000480
000481 TGGAATCCAT CAATATCAAA ATCAATTTAT TTATAATCCC TATGTCTAGA ATGGTAGCTT GCTTTAATTG TCCTAAATAT 000560
000561 TTTTCTGTGT CCTTTCAACT ATTATATAGC ACAGCTTGCA TCTTAAGGTT GACAGAGGAT CTTCTCTCCC CATTCCAGTT 000640
000641 TTACAGATGA ATAATCTATT GAAATGCTTC TCTGAGGGCC ACAAGCATAG ACAGAAATCT CACTATCAAG ATTCTTTTTG 000720
000721 CTCTTGGTAA AGGAGACTCC AAAGAAAAAA aaagagagag agagaagaaa gagaa
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Predicted Small Protein

Name NONHSAT018430_smProtein_479:649
Length 57
Molecular weight 6617.8615
Aromaticity 0.160714285714
Instability index 72.61625
Isoelectric point 8.58819580078
Runs 8
Runs residual 0.0104410616706
Runs probability 0.0604243949832
Amino acid sequence MESINIKINLFIIPMSRMVACFNCPKYFSVSFQLLYSTACILRLTEDLLSPFQFYR
Secondary structure LLLEEEEEEEEEELLLLEEEEELLLLEEEEEEEHHHHHHHHHHHHHHHLLLLLLLL
PRMN LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL
PiMo oooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiii