NONHSAT018435

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT018435

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

997 nt

Genomic location

chr11-:23959355..23960351

Exon number

1

Exons

23959355..23960351

Genome context

Sequence
000001 GGAGAAAGCT CCAAAAGCAA GCCCTGGGCC CTGAACAAAA TCTGGAGACA TTATTAAACC TGGCAACCTC GGTGTTCTAT 000080
000081 AATAGGGACC AAGAGGAACA GGCCCAAAAG GAAAAGTGAG ATCAGAGAAA GGCCGCAGCC TTAGTCATGG CCCTCAGACA 000160
000161 AACAAACCTT GGTGGTTCAG AGAGGACAGA AAATGGAGCA GGCCAATCAC CTGGTAGGGC TTGTTATCAG TGTGGTTTAC 000240
000241 TAGGACTCTT TAAAAAAGAT TGTCCAATGA GAAACAAGCT GCCCCCTCGT CCATGTCCAC TATGCCGAGG CAATCACTGG 000320
000321 AAGGTGCACT ACCCCAGAGC ATGAAGGTTC CCTGGGTCAG AAGCCCCCAG CCAGATGATC CAACAACAGG ACTGAGGGTG 000400
000401 CCCAGGGCAA GCGCCAGATC ATGTCATCGC CCTCACTGAG CCCCGGGTAT GTTTAACTAT TGAGGGCCAG GAAATTGACT 000480
000481 TCCTCCTGGA CACTGGTGCA GCCTTCTCAG CGTTAATCTC TTGTCCTGGA CAACTGTCCT CGAGGTCCAT TACCATCTGA 000560
000561 GAAATCCTGG GACAGCCTGT AACCAGGTAT TTCTCCCACC TTCTCAGTTG TAATTGGGAG ACTTTGCTCT TTTCACATGC 000640
000641 CTTTCTTGTT ATGCCTGAAA GTCCCACACC CTTATTAGGG AGGGATATAT TAGCCAAGGC TGGAGCTACT ATCTACATGA 000720
000721 ATATGGGGAA CAAGTTACCC ATTTGTTGTC CCATACTTGA GGAGGGAATC AACCCTGAAG TCTGGGCATT GGAAGGACAA 000800
000801 TTTGGAAGGG CAAAAAATGC CTGCCCAGTC AAAATCAGGT TAAAAGATCC CACCACTTTT CCTTATCAAA AGCAATATCC 000880
000881 CTTAAGGCCT GAAGCTCATA AAGGATTACA GAATATTGTT AAACGTTTGA AAGCTCAAGG CTTAGTAAGG AAATGCAGCA 000960
000961 GTCCCTGCAA CACCCCAATT CTAGTAGTAC AAAAACC
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Predicted Small Protein

Name NONHSAT018435_smProtein_146:343
Length 66
Molecular weight 7238.358
Aromaticity 0.0615384615385
Instability index 53.92
Isoelectric point 9.86785888672
Runs 9
Runs residual 0.0118269230769
Runs probability 0.0283813224989
Amino acid sequence MALRQTNLGGSERTENGAGQSPGRACYQCGLLGLFKKDCPMRNKLPPRPCPLCRGNHWKV
HYPRA
Secondary structure LLEEEELLLLLLLLLLLLLLLLLHHHHLLLLLLLEELLLLLLLLLLLLLLLLLLLLLEEE
ELLLL
PRMN -
PiMo -