NONHSAT018435
Revision as of 20:28, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018435 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
997 nt |
Genomic location |
chr11-:23959355..23960351 |
Exon number |
1 |
Exons |
23959355..23960351 |
Genome context |
|
Sequence |
000001 GGAGAAAGCT CCAAAAGCAA GCCCTGGGCC CTGAACAAAA TCTGGAGACA TTATTAAACC TGGCAACCTC GGTGTTCTAT 000080
000081 AATAGGGACC AAGAGGAACA GGCCCAAAAG GAAAAGTGAG ATCAGAGAAA GGCCGCAGCC TTAGTCATGG CCCTCAGACA 000160 000161 AACAAACCTT GGTGGTTCAG AGAGGACAGA AAATGGAGCA GGCCAATCAC CTGGTAGGGC TTGTTATCAG TGTGGTTTAC 000240 000241 TAGGACTCTT TAAAAAAGAT TGTCCAATGA GAAACAAGCT GCCCCCTCGT CCATGTCCAC TATGCCGAGG CAATCACTGG 000320 000321 AAGGTGCACT ACCCCAGAGC ATGAAGGTTC CCTGGGTCAG AAGCCCCCAG CCAGATGATC CAACAACAGG ACTGAGGGTG 000400 000401 CCCAGGGCAA GCGCCAGATC ATGTCATCGC CCTCACTGAG CCCCGGGTAT GTTTAACTAT TGAGGGCCAG GAAATTGACT 000480 000481 TCCTCCTGGA CACTGGTGCA GCCTTCTCAG CGTTAATCTC TTGTCCTGGA CAACTGTCCT CGAGGTCCAT TACCATCTGA 000560 000561 GAAATCCTGG GACAGCCTGT AACCAGGTAT TTCTCCCACC TTCTCAGTTG TAATTGGGAG ACTTTGCTCT TTTCACATGC 000640 000641 CTTTCTTGTT ATGCCTGAAA GTCCCACACC CTTATTAGGG AGGGATATAT TAGCCAAGGC TGGAGCTACT ATCTACATGA 000720 000721 ATATGGGGAA CAAGTTACCC ATTTGTTGTC CCATACTTGA GGAGGGAATC AACCCTGAAG TCTGGGCATT GGAAGGACAA 000800 000801 TTTGGAAGGG CAAAAAATGC CTGCCCAGTC AAAATCAGGT TAAAAGATCC CACCACTTTT CCTTATCAAA AGCAATATCC 000880 000881 CTTAAGGCCT GAAGCTCATA AAGGATTACA GAATATTGTT AAACGTTTGA AAGCTCAAGG CTTAGTAAGG AAATGCAGCA 000960 000961 GTCCCTGCAA CACCCCAATT CTAGTAGTAC AAAAACC |
Predicted Small Protein
Name | NONHSAT018435_smProtein_146:343 |
Length | 66 |
Molecular weight | 7238.358 |
Aromaticity | 0.0615384615385 |
Instability index | 53.92 |
Isoelectric point | 9.86785888672 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0283813224989 |
Amino acid sequence | MALRQTNLGGSERTENGAGQSPGRACYQCGLLGLFKKDCPMRNKLPPRPCPLCRGNHWKV HYPRA |
Secondary structure | LLEEEELLLLLLLLLLLLLLLLLHHHHLLLLLLLEELLLLLLLLLLLLLLLLLLLLLEEE ELLLL |
PRMN | - |
PiMo | - |