NONHSAT021240

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT021240

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

478 nt

Genomic location

chr11+:47413462..47414644

Exon number

2

Exons

47413462..47413795,47414501..47414644

Genome context

Sequence
000001 GATCCCTCCC CTGGGGCAGG GCAGGGGGAG ACGGCAGGGG CCACTGGGCG CTGATGGCCA GCCAGGGAAG GTAACAGGTG 000080
000081 GTGCTATGGT CCACGCCCTG CTTCCCCCTT GAGCTTCAGG CCAACCCTGC TCCTGCCCTG GTCACAGCGC TAGAAAACGT 000160
000161 CCGCCCTCCC AGGAGGGAGA TGAAGGTACA AGATGAAGCA AGGAGCAGTC AGAGGAAGAG AGAAGGACAC TGGGTTCTAG 000240
000241 ATTTCCCCAG TGAAATCTAG AATCTCCAGA CACTTTGTAG CTGCCTGACC TTGgacaggg tctcactctg ttgcccaggc 000320
000321 tggagtgcag tggtGTGACC ATCGGGGTTG GAGTGTTTCC AAGCATGAAG GGGAACTGAG AACTGTGGGA ATGGGCCTTG 000400
000401 TGTAGTGCAG GGTGGGCCGG GCCTGGTGGG AGGGGGCCTG CTCCCGGGAG CTCAGACTGA TGGGGTCCTG GGGTGAAG
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Predicted Small Protein

Name NONHSAT021240_smProtein_179:259
Length 27
Molecular weight 3129.4647
Aromaticity 0.0769230769231
Instability index 80.3692307692
Isoelectric point 6.52838134766
Runs 5
Runs residual 0.0169946332737
Runs probability 0.0355060943297
Amino acid sequence MKVQDEARSSQRKREGHWVLDFPSEI
Secondary structure LLLHHHHHHHHHHHLLLEEELLLLLL
PRMN -
PiMo -