NONHSAT021364

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT021364

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

904 nt

Genomic location

chr11+:55211911..55212814

Exon number

1

Exons

55211911..55212814

Genome context

Sequence
000001 ATGGGAACAA GTAATAATGT TACAGAATTT GTCCTCCCAG GCCTCTCTCA GGATCCTGAT GTGCAAAAAG CATTATTTGT 000080
000081 AATGTTTTTA CTCACATACA ATGTGACTAT GGTGGGCAAC CTTCTCATTG TGGTGACCAT TATTGCCATC GCCTCCTTGG 000160
000161 ACTCCCCAGT GTCCTTCTTC CTCGCATGCC TGTCATTTAT TGATGCTGTA TATTCCACTT CCTTTTCCCC TAAGTTGATG 000240
000241 ATAGACTTAC TCTGTGATAA AAAAGACTGT TTCTTTCCTG GCTTGCATGG GCCAGCTATT TATAAACTAC CCATTTGGTG 000320
000321 GTATTGAGGT CTTTCTTTTG GTGGGTATGG CCTGTGATCA CTATGTGGAC ATCTGTAAGC TACTGCACTA TTTGACCATC 000400
000401 ATGAACTGGC AGGTTTGCAT CCTCCTGTTT ATGGTGGCTG TGACTGGAGG TTTTTGCATT CTATGTTTCA AATTGTTGTT 000480
000481 GTGTACAGTC TCCCTTTCTG TGGCCCCAAT GTCATTGACC ATTTTGTGAC ATGTACCCAT TATTGGAAAT GGTGTGCACT 000560
000561 GACACTTACT TTATAGGCCT CACTGTGATT GCCAATGGTG GAGCAGTCTG TATGGTCATC TTCATCCTTC TACTAATCTC 000640
000641 CTATGGAGTC ATCCTAAACT CCCTTAAAAC TTATAGTCAG GAAGGCGGGC ATAAAGCCCT GTCTACCTGC AGCTCCAACA 000720
000721 TTACTGTTGT GTCCCCTTTT TTGATCCCTG TATTTTCATC TATGTTAGAC CTGATTCAAA CTTTCCTATT GATAAATTCA 000800
000801 TGACTGTGTT TTATACAATT ATCACATCCA TGTTGAATCC ATTAATATAC ACACTGAGAA ATTTAGAGGT GAGAATTGCT 000880
000881 GTGAAAAAAC TCTGGTGTAA AAAC
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Predicted Small Protein

Name NONHSAT021364_smProtein_530:802
Length 91
Molecular weight 9769.5631
Aromaticity 0.1
Instability index 48.2744444444
Isoelectric point 4.74908447266
Runs 16
Runs residual 0.0379188712522
Runs probability 0.0295828917152
Amino acid sequence MYPLLEMVCTDTYFIGLTVIANGGAVCMVIFILLLISYGVILNSLKTYSQEGGHKALSTC
SSNITVVSPFLIPVFSSMLDLIQTFLLINS
Secondary structure LLLLEEEEEELLEEEEEEEEELLLEEEHHHHHHHHHHHHHHHHHHHHHLLLLLLEEEEEL
LLLEEEELLLEEHHHHHHHHHHHHHHEELL
PRMN LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL
LLLHHHHHHHHHHHHHHHHHHLLLLLLLLL
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