NONHSAT021367

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT021367

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

923 nt

Genomic location

chr11+:55304478..55305400

Exon number

1

Exons

55304478..55305400

Genome context

Sequence
000001 ATGGGGACTT CAAATAATGA GACTGAATTC ATTCTTTTGG GCATTACAAA AAATCCAGAA CTAAGGAAAA TATTCTCTGC 000080
000081 TTTGTTTCTA GCCATGTATG TGACCACAGT GTTGGGAAAT CTATTCATTG TGGTGACTCT GGCTGCAAGT TGGAGTCTGA 000160
000161 GATCACCTAT GTACTTTTCC CTTACTTCCT TGTCTCTCAT GGGTGCCACC TACTCTTCCA TCACTGCCCC TAAGATGACT 000240
000241 GTGGACTCTT TGAGAACACT ACCATTTCCC TTGAAGGCTG CATGACCCAG CTCTTTGCAG AGCATTTCTC TGATGGTGTA 000320
000321 GCGATCATCC TTCTCACTGT GATGGTCTGT GACTGCTATG AGGCCATCAG TAAGCCCCTG CATGACACAA CCATCATGAG 000400
000401 TCCACGGGTG TGCTGCTGTT GGTGGTAGAA GCTTGGGTGG GGGGATTAAC ACATGCCACA ATACAGCTTT TTTTTTTTCA 000480
000481 TATATCAAAT ACCCTTCTGT GGTCCCAATA TTATTGACCA TTTTATATGT GATTTGTTTC CATTGTTAAA ACTTGCTTAC 000560
000561 ATGGACACCC ACATGCTGGG TCTCTTAGTC ATCCTCAACA GTGGGGTGAT GTGTATGGCC ATCTTCCTTA TCCTAATTGC 000640
000641 ATCCTACATT GTCACCCTGT ACTCTCTGAA GTCTTGCAGC TCGGTAGGTT GACGCAACAC ACTTTCCACC TGTGGCTCCC 000720
000721 ACCACACAGT GGTCATCTTG TTCTTCGTGG AGTGTATTTT CTTGTACATA AGACCTGTGG TCACTTACCC CATAGACAAG 000800
000801 GATATGGCTA TTTCCTTTAC TATTGTTGCA CCCATGTTAA ATCCTCTGAT CTATACCCTG AGGGGCATCA AGGTAAAAAA 000880
000881 TGCCATAAGA AAAATGTGGA TGAAACAGGG GACCCTAGGT GGT
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Predicted Small Protein

Name NONHSAT021367_smProtein_452:691
Length 80
Molecular weight 8967.8121
Aromaticity 0.164556962025
Instability index 42.4582278481
Isoelectric point 5.94281005859
Runs 7
Runs residual 0.0516733136813
Runs probability 0.0361369773135
Amino acid sequence MPQYSFFFFIYQIPFCGPNIIDHFICDLFPLLKLAYMDTHMLGLLVILNSGVMCMAIFLI
LIASYIVTLYSLKSCSSVG
Secondary structure LLLLLEEEEEEEELLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLHHHHHHHHHH
HHHHHHHHHHHHHHHLLLL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHH
HHHHHHHLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTT
TTTTTTTiiiiiiiiiiii