NONHSAT021564
Revision as of 20:33, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021564 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
509 nt |
Genomic location |
chr11-:59950643..59952139 |
Exon number |
2 |
Exons |
59950643..59950804,59951793..59952139 |
Genome context |
|
Sequence |
000001 ATTCCGAAGg gttctgtgct aggaacctta cacgtgttgt ctcacataat ccttaaaacT CAGAAATGAT TTTAAATTAA 000080
000081 ATAGCACAGA GAGGAAAACT GACTGGAGAG GGAGCCTTTG CTTAGGTAGG CAACTTTAAC TGGTTTATTA GCACATTCCC 000160 000161 CTGAAGGGAA AGGGGGTGTG ATTGCTCCTG AAGAGACCAA AGAGACTGGG CTCCTTTTTA ATCAAAGCTC AGGAGGAGAG 000240 000241 CTGCATTCCA CTGTTTCACA GATGCTGTGA GGGTGACAAA GATGCAGGGC ACCCACTGGA AACACAGACG GCACTCTGCG 000320 000321 AAAGAGGAAG GGGCGCCAGG AGCTTGGatt agaaaactga agcttcaaga acagacttgc ctaacaacag gaaacttgta 000400 000401 tgtctcgaag tggcaattca cacataaggc tccatgactc ctgaactcTC ACAAATATTA GTTGGCTCTT TTCATGGTTT 000480 000481 TACTGAAGTT GCTAGAAGTT TACAGAAAA |
Predicted Small Protein
Name | NONHSAT021564_smProtein_281:436 |
Length | 52 |
Molecular weight | 5972.7807 |
Aromaticity | 0.0980392156863 |
Instability index | 44.2823529412 |
Isoelectric point | 10.1323852539 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0198531865199 |
Amino acid sequence | MQGTHWKHRRHSAKEEGAPGAWIRKLKLQEQTCLTTGNLYVSKWQFTHKAP |
Secondary structure | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLLEELLLLEEEELLEEEELLL |
PRMN | - |
PiMo | - |