NONHSAT021661

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT021661

Source

NONCODE4.0

Same with

,

Classification

sense

Length

534 nt

Genomic location

chr11+:61135377..61136683

Exon number

2

Exons

61135377..61135470,61136244..61136683

Genome context

Sequence
000001 ATCTCACATC TCCTTCAGAA CTTACGCTGG AAAAACTCCA ACAGCTTCAT ATGGACAGAT GGACTTCAAA TGCTGTTTGT 000080
000081 ATTCCAGAGA CTAGGGAGAG TTGGCCCTAT GCATGGGCAA ACAGCTGGAC TTTCCAAGGA AGGTTCAGAC TAGCTGTGTT 000160
000161 CAGCATTCAA GAAGGAAGAT CCTCCCTCTT GCACAATTAG AGTGTCCCCA TCGGTCTCCA GTGCGGCATC CCTTCCTTGC 000240
000241 CTTCTACCTC TGTTCCACCC CCTTTCCTTC CTTTCCTCTC TGTACCATTC ATTCTCCCTG ACCGGCCTTT CTTGCCGAGG 000320
000321 GTTCTGTGGC TCTTACCCTT GTGAAGCTTT TCCTTTAGCC TGGGACAGAA GGACCTCCCA GCCCCCAAAG GATCTCCCAG 000400
000401 TGACCAAAGG ATGCGAAGAG TGATAGTTAC GTGCTCCTGA CTGATCACAC CGCAGACATT TAGATTTTTA TACCCAAGGC 000480
000481 ACTTTAAAAA AATGTTTTAT AAATAGAGAA TAAATTGAAT TCTTGTTCCA TAAA
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Predicted Small Protein

Name NONHSAT021661_smProtein_50:199
Length 50
Molecular weight 5803.4219
Aromaticity 0.163265306122
Instability index 46.6469387755
Isoelectric point 8.00006103516
Runs 9
Runs residual 0.0216216216216
Runs probability 0.032709179768
Amino acid sequence MDRWTSNAVCIPETRESWPYAWANSWTFQGRFRLAVFSIQEGRSSLLHN
Secondary structure LLLLLLLLEELLLLLLLLLHHHHLLLEEEEEEEEEEEEEELLLEELLLL
PRMN -
PiMo -