NONHSAT021707
Revision as of 20:34, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021707 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
553 nt |
Genomic location |
chr11-:61557569..61560074 |
Exon number |
2 |
Exons |
61557569..61558074,61560028..61560074 |
Genome context |
|
Sequence |
000001 GTTCTTCCGG TGGCGGAGCG GCGGATTAGC CTTCGCGGGG CAAAATGGAG CTCGAGGCCA TGAGCAGATA TACCAGCCCA 000080
000081 GTGAACCCAG CTGTCTTCCC CCATCTGACC GTGGTGCTTT TGGCCATTGG CATGTTCTTC ACCGCCTGGT TCTTCGTGTA 000160 000161 TCCTTTCACT GAGCAGCCAG AGGACCAGCA TTAGTGATGT GGGAAGCTCA GGGAGAAACC ACGCTAGGTA CATGGACCCC 000240 000241 GCCGGTTTTG TACATTGGAT TGGGGCTGAG AGAAGGTAAG GAGGAGAGGA GGGCTAGTGA TGCCCAGGGG CAGGTTATAG 000320 000321 CCTTATTTCC CAAGTTCAGG TGAGCTCAGT TTGTTCTTTG GATTTCCAGG ACAGTGAGCA GGGGACCTGG CTGGAGTGGA 000400 000401 GGTGGGGAAT AGGGGTGCTA CAGTtggaaa ggtggtataa ggaagggtgc actcaggtgt caggaggtct gagggctagt 000480 000481 cccagctccg gccctcatga gctgtgtgac ctggggcaag tgacctaact cctctgggtc tcattttctt cat |
Predicted Small Protein
Name | NONHSAT021707_smProtein_44:193 |
Length | 50 |
Molecular weight | 5706.5232 |
Aromaticity | 0.183673469388 |
Instability index | 63.7734693878 |
Isoelectric point | 4.55877685547 |
Runs | 6 |
Runs residual | 0.0396028681743 |
Runs probability | 0.0402314078785 |
Amino acid sequence | MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYPFTEQPEDQH |
Secondary structure | LEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHEEEEEELLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooo |