NONHSAT021707

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT021707

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

553 nt

Genomic location

chr11-:61557569..61560074

Exon number

2

Exons

61557569..61558074,61560028..61560074

Genome context

Sequence
000001 GTTCTTCCGG TGGCGGAGCG GCGGATTAGC CTTCGCGGGG CAAAATGGAG CTCGAGGCCA TGAGCAGATA TACCAGCCCA 000080
000081 GTGAACCCAG CTGTCTTCCC CCATCTGACC GTGGTGCTTT TGGCCATTGG CATGTTCTTC ACCGCCTGGT TCTTCGTGTA 000160
000161 TCCTTTCACT GAGCAGCCAG AGGACCAGCA TTAGTGATGT GGGAAGCTCA GGGAGAAACC ACGCTAGGTA CATGGACCCC 000240
000241 GCCGGTTTTG TACATTGGAT TGGGGCTGAG AGAAGGTAAG GAGGAGAGGA GGGCTAGTGA TGCCCAGGGG CAGGTTATAG 000320
000321 CCTTATTTCC CAAGTTCAGG TGAGCTCAGT TTGTTCTTTG GATTTCCAGG ACAGTGAGCA GGGGACCTGG CTGGAGTGGA 000400
000401 GGTGGGGAAT AGGGGTGCTA CAGTtggaaa ggtggtataa ggaagggtgc actcaggtgt caggaggtct gagggctagt 000480
000481 cccagctccg gccctcatga gctgtgtgac ctggggcaag tgacctaact cctctgggtc tcattttctt cat
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Predicted Small Protein

Name NONHSAT021707_smProtein_44:193
Length 50
Molecular weight 5706.5232
Aromaticity 0.183673469388
Instability index 63.7734693878
Isoelectric point 4.55877685547
Runs 6
Runs residual 0.0396028681743
Runs probability 0.0402314078785
Amino acid sequence MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYPFTEQPEDQH
Secondary structure LEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHEEEEEELLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooo