NONHSAT021929
Revision as of 20:35, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT021929 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
458 nt |
Genomic location |
chr11+:63768587..63769239 |
Exon number |
2 |
Exons |
63768587..63768992,63769188..63769239 |
Genome context |
|
Sequence |
000001 ACAACCGGGG CGCAGCGGGA GGCATGGAGG AAACGCTCCA GCAGCCCAAC CTCGCCAGGG CACCGCGCAG GAGAGGCGCG 000080
000081 GCCtcaggca ggcctgggtc cagcccgggc tcacccctca tcggctgtga gatcctgccc cttcccctct ctggcgtcca 000160 000161 ccctcttatc tggaataccg ggacagcgac cctcccacag aggAAAACGC CGCGTGCTGG CCGGGAGGAC AGGGCCCATC 000240 000241 TTTGGCAGCT CTGATCGCCC ACgccaggag ctcctcaggc accagctgcc tggtgctcac aggcgggcat caagagagga 000320 000321 ccatcattcc ccattttaca gatggacaaa ccaaggcCAC CTTCTCCTTC ATCACCTCAG TCTCGGCACA GTTCCAGGGA 000400 000401 TGCCAGGGAG AAAGGCAGCT GTAGCCCAGG GCGAGGCTGA GATGGAGCAA GAAGGCAG |
Predicted Small Protein
Name | NONHSAT021929_smProtein_23:253 |
Length | 77 |
Molecular weight | 8241.3551 |
Aromaticity | 0.0263157894737 |
Instability index | 70.1763157895 |
Isoelectric point | 11.466003418 |
Runs | 7 |
Runs residual | 0.0493042952208 |
Runs probability | 0.0276326746915 |
Amino acid sequence | MEETLQQPNLARAPRRRGAASGRPGSSPGSPLIGCEILPLPLSGVHPLIWNTGTATLPQR KTPRAGREDRAHLWQL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLLLLLLLLLEELLLLLLLLLL LLLLLLHHHHHHHHLL |
PRMN | - |
PiMo | - |