NONHSAT021942

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT021942

Source

NONCODE4.0

Same with

,

Classification

sense

Length

985 nt

Genomic location

chr11-:63918390..63919879

Exon number

2

Exons

63918390..63918747,63919253..63919879

Genome context

Sequence
000001 TCCTGCCTCT GCAGCCTTTC TGAAGGGCCT GAGTGACAAG CAGCGGGAGG AACATTACTT CTGCAAGGAC TTTGTCAGGC 000080
000081 TGAAGAAGAT CCCGACATGG AAGGAGATGG CGAAAGGTAG GCCCTGCTCG GGGGAGGCCC TGGTGGGCAG GCTCCAGACC 000160
000161 CGTGGCTTGG GAGAATTGTG CAGACAAGAA GAGCTAGTCC AGTGGCATGT ATCGAGTGCT TGCTGCAGGC AGGTGCTCCG 000240
000241 CGTGTATCAC CTCATTCAAT TATTTTATTT TATTTTTTGA GATGGAATTT CACTCTTTTT GCGCAGGCTG GAGTGCAATG 000320
000321 GCTCGATCTT GGCTCACTGC AACCTCCACC TCCCGGGTTC AAGCGATTCT CCTGCCTCAG CCTCCTGAGT AGCTGGGATT 000400
000401 ACAGACATGC ACCACCATGC CTGGATAATT TTTGTATTTT TAGTAGAGAT GGGGTTTCAC CATATTGGCC AGGCTGGTCT 000480
000481 CGAACTACTG ACCTCAAGTG ATCTGCCCGC CACGGCCTCC CAAAGTGCTG GGATTACAGG CGTCAGCAAC TGCGCCTGGC 000560
000561 CATCTCATTC AATTATTAAC ACAACAAGTG CAATTTTTAT CCCCATTGTA TGGTTGGAAA CAGAGCCATC ACCAAGCTGG 000640
000641 AGGTGGACGC CATCGTCAAC GCCGGTGAGT GGCTGGCCTG AACCAGAGAC CTGGTGGCCG CCCTGTTGCC TTTGCTCTGC 000720
000721 TCTGCTGTGC CAGGCCTGGG TGGACGCCAC CTGGCTCCAG TGAGGCTCGG GTTGCTGGCA AGGACAGCCT GCTGGCGCCA 000800
000801 TGGCAGCCCA ACGTGTCGGC CACTCGGGCT CCTCTTCCCT TGAAACCCTG ACCTGCTGTG TCGGGGGCGC CTTGCTCCAC 000880
000881 TGAGACCCAT TAGTGGCCGG GGAAGGGGGA GAGCTGGGCT GAAACTGGGC TGCCCTGCCA GGAAGGCAGA GGCCACAGCG 000960
000961 GGGAGGTCTG ACCTTGGGGG GCCAC
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Predicted Small Protein

Name NONHSAT021942_smProtein_206:391
Length 62
Molecular weight 6913.977
Aromaticity 0.16393442623
Instability index 56.3721311475
Isoelectric point 7.74871826172
Runs 14
Runs residual 0.0766911626154
Runs probability 0.0253362606304
Amino acid sequence MYRVLAAGRCSACITSFNYFILFFEMEFHSFCAGWSAMARSWLTATSTSRVQAILLPQPP
E
Secondary structure LEEEEELLLEELEELLLLHHHHHHHHHHHHHHLLHHHHHHHHHHHLLLLHHHEEELLLLL
L
PRMN LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL
L
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