NONHSAT021942
Revision as of 20:35, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021942 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
985 nt |
Genomic location |
chr11-:63918390..63919879 |
Exon number |
2 |
Exons |
63918390..63918747,63919253..63919879 |
Genome context |
|
Sequence |
000001 TCCTGCCTCT GCAGCCTTTC TGAAGGGCCT GAGTGACAAG CAGCGGGAGG AACATTACTT CTGCAAGGAC TTTGTCAGGC 000080
000081 TGAAGAAGAT CCCGACATGG AAGGAGATGG CGAAAGGTAG GCCCTGCTCG GGGGAGGCCC TGGTGGGCAG GCTCCAGACC 000160 000161 CGTGGCTTGG GAGAATTGTG CAGACAAGAA GAGCTAGTCC AGTGGCATGT ATCGAGTGCT TGCTGCAGGC AGGTGCTCCG 000240 000241 CGTGTATCAC CTCATTCAAT TATTTTATTT TATTTTTTGA GATGGAATTT CACTCTTTTT GCGCAGGCTG GAGTGCAATG 000320 000321 GCTCGATCTT GGCTCACTGC AACCTCCACC TCCCGGGTTC AAGCGATTCT CCTGCCTCAG CCTCCTGAGT AGCTGGGATT 000400 000401 ACAGACATGC ACCACCATGC CTGGATAATT TTTGTATTTT TAGTAGAGAT GGGGTTTCAC CATATTGGCC AGGCTGGTCT 000480 000481 CGAACTACTG ACCTCAAGTG ATCTGCCCGC CACGGCCTCC CAAAGTGCTG GGATTACAGG CGTCAGCAAC TGCGCCTGGC 000560 000561 CATCTCATTC AATTATTAAC ACAACAAGTG CAATTTTTAT CCCCATTGTA TGGTTGGAAA CAGAGCCATC ACCAAGCTGG 000640 000641 AGGTGGACGC CATCGTCAAC GCCGGTGAGT GGCTGGCCTG AACCAGAGAC CTGGTGGCCG CCCTGTTGCC TTTGCTCTGC 000720 000721 TCTGCTGTGC CAGGCCTGGG TGGACGCCAC CTGGCTCCAG TGAGGCTCGG GTTGCTGGCA AGGACAGCCT GCTGGCGCCA 000800 000801 TGGCAGCCCA ACGTGTCGGC CACTCGGGCT CCTCTTCCCT TGAAACCCTG ACCTGCTGTG TCGGGGGCGC CTTGCTCCAC 000880 000881 TGAGACCCAT TAGTGGCCGG GGAAGGGGGA GAGCTGGGCT GAAACTGGGC TGCCCTGCCA GGAAGGCAGA GGCCACAGCG 000960 000961 GGGAGGTCTG ACCTTGGGGG GCCAC |
Predicted Small Protein
Name | NONHSAT021942_smProtein_206:391 |
Length | 62 |
Molecular weight | 6913.977 |
Aromaticity | 0.16393442623 |
Instability index | 56.3721311475 |
Isoelectric point | 7.74871826172 |
Runs | 14 |
Runs residual | 0.0766911626154 |
Runs probability | 0.0253362606304 |
Amino acid sequence | MYRVLAAGRCSACITSFNYFILFFEMEFHSFCAGWSAMARSWLTATSTSRVQAILLPQPP E |
Secondary structure | LEEEEELLLEELEELLLLHHHHHHHHHHHHHHLLHHHHHHHHHHHLLLLHHHEEELLLLL L |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL L |
PiMo | iiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooooooooooooooooooo o |