NONHSAT023226
Revision as of 20:40, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT023226 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
620 nt |
Genomic location |
chr11-:77333688..77336596 |
Exon number |
2 |
Exons |
77333688..77333718,77336008..77336596 |
Genome context |
|
Sequence |
000001 ACCTATTAAT ATCAAAGGTT GTGAATGTAG TGAGAATATT GTAGACACTC TGTCATCTGG GTATATTTTG TGAGTGGACT 000080
000081 CTGGTTAGTT TTACTGATTG GTGCTGTTGA CTTAATCTCA CCTGCTGGAT GGCAGAGGAG TTATGGCAGT TTTAAAGTGG 000160 000161 AAGATCTCAG GATGGCTGGA AAGAGCCCTA TCAGCTGAGA GCAGTCTTCA CCCTTCACCC TGATGCCAGC AGTCTTACCA 000240 000241 GGACTCTGAC CCTTTTTTCT TGGAAAATCC CACGAGCCAT GAAGAGATTG CAATGATCTC TCATAATGAA CTCTTATTAT 000320 000321 TTTATGACTT GTCTTTTGCT TCAACCGCTT TCAAGATTGA TCTTACAATT TGGCAGATTT TGTAAATACT GTGGCGTTTT 000400 000401 GTGTACCCAT TAAATTTATT TGCACTGATG GTTACTTTTA TTACAAAAAA AGATTGGTTA CAGTTTAATT TCCTTGTTCA 000480 000481 GTGGAGGCAA TGTTCACTGC AATGTGCGAA TGCCAGGCCT TGCATCCAGA TCCTGAGGAT GAGGATTCAG ATGACTACGA 000560 000561 TGGAGAAGAA TATGATGTGG AAGCACATGA ACAAGGACAG GGGGACATCC CTACATTTTA |
Predicted Small Protein
Name | NONHSAT023226_smProtein_305:412 |
Length | 36 |
Molecular weight | 4164.0359 |
Aromaticity | 0.171428571429 |
Instability index | 60.2171428571 |
Isoelectric point | 8.88177490234 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0 |
Amino acid sequence | MNSYYFMTCLLLQPLSRLILQFGRFCKYCGVLCTH |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHHHLLEELLL |
PRMN | - |
PiMo | - |