NONHSAT024173

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT024173

Source

NONCODE4.0

Same with

,

Classification

sense

Length

578 nt

Genomic location

chr11+:111888298..111889945

Exon number

2

Exons

111888298..111888609,111889680..111889945

Genome context

Sequence
000001 ATATTTAATA CTGTTTTCAT TCCCTAGTGA TGACTGGTTC TCCAGCCTCT GCTGTTTTAG TCATCTGGGT TATCGGGGCA 000080
000081 GTGACCTAAC AAGGGGCTAT TTCTGCTTAT TGACTTTGGC AGGGGGCTGT GTTTAAAGTT AACATCTTAT CTTTCCAGCT 000160
000161 ATTGATCAAC AGTCTATTTT AGTGCTCTCT CCTTGTGTTG CAGGTTGGAG GAGGTGACGT TAAAGGATTT TAAAGCAGCT 000240
000241 ATTGATCGGG AAGGAAATCA CCGGTATCAC TTCAAAGCAC TGGATCCTGA GTTTGGCACT GTCAAAGAGG AGATTTTCCA 000320
000321 TGATGATGAT GCCATCCCTG GATGGGAAGG GAAAATTGTA GCTTGGGTGG AAGAAGACCA TGGAGAGAAT TAATGCCAAG 000400
000401 TATCAGATTG AGGGCTTATG GAACCTGGTC ACTCCCTGGC TGCTTCACTC AGGAAAGGGA ACTAAAACCA GAATACACTA 000480
000481 AGAAGTTTCT AGTTTGTGTG CCAAAACAGA AGCTTCTCCA AGCATGATGG CCACAGGTCA GTCCTCTTTC TGTGCCTGGC 000560
000561 ATATCTGGTA CTTAAAAT
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Predicted Small Protein

Name NONHSAT024173_smProtein_341:526
Length 62
Molecular weight 7155.3837
Aromaticity 0.0983606557377
Instability index 45.3901639344
Isoelectric point 9.93817138672
Runs 11
Runs residual 0.0275108347466
Runs probability 0.028199322317
Amino acid sequence MGRENCSLGGRRPWRELMPSIRLRAYGTWSLPGCFTQERELKPEYTKKFLVCVPKQKLLQ
A
Secondary structure LLLLLLLLLLLLLHHHHLLLLEEEELLLLLLLLLLLLLEEELLLLLLEEEEEELLHHHLL
L
PRMN -
PiMo -