NONHSAT024173
Revision as of 20:44, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT024173 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
578 nt |
Genomic location |
chr11+:111888298..111889945 |
Exon number |
2 |
Exons |
111888298..111888609,111889680..111889945 |
Genome context |
|
Sequence |
000001 ATATTTAATA CTGTTTTCAT TCCCTAGTGA TGACTGGTTC TCCAGCCTCT GCTGTTTTAG TCATCTGGGT TATCGGGGCA 000080
000081 GTGACCTAAC AAGGGGCTAT TTCTGCTTAT TGACTTTGGC AGGGGGCTGT GTTTAAAGTT AACATCTTAT CTTTCCAGCT 000160 000161 ATTGATCAAC AGTCTATTTT AGTGCTCTCT CCTTGTGTTG CAGGTTGGAG GAGGTGACGT TAAAGGATTT TAAAGCAGCT 000240 000241 ATTGATCGGG AAGGAAATCA CCGGTATCAC TTCAAAGCAC TGGATCCTGA GTTTGGCACT GTCAAAGAGG AGATTTTCCA 000320 000321 TGATGATGAT GCCATCCCTG GATGGGAAGG GAAAATTGTA GCTTGGGTGG AAGAAGACCA TGGAGAGAAT TAATGCCAAG 000400 000401 TATCAGATTG AGGGCTTATG GAACCTGGTC ACTCCCTGGC TGCTTCACTC AGGAAAGGGA ACTAAAACCA GAATACACTA 000480 000481 AGAAGTTTCT AGTTTGTGTG CCAAAACAGA AGCTTCTCCA AGCATGATGG CCACAGGTCA GTCCTCTTTC TGTGCCTGGC 000560 000561 ATATCTGGTA CTTAAAAT |
Predicted Small Protein
Name | NONHSAT024173_smProtein_341:526 |
Length | 62 |
Molecular weight | 7155.3837 |
Aromaticity | 0.0983606557377 |
Instability index | 45.3901639344 |
Isoelectric point | 9.93817138672 |
Runs | 11 |
Runs residual | 0.0275108347466 |
Runs probability | 0.028199322317 |
Amino acid sequence | MGRENCSLGGRRPWRELMPSIRLRAYGTWSLPGCFTQERELKPEYTKKFLVCVPKQKLLQ A |
Secondary structure | LLLLLLLLLLLLLHHHHLLLLEEEELLLLLLLLLLLLLEEELLLLLLEEEEEELLHHHLL L |
PRMN | - |
PiMo | - |