NONHSAT024409
Revision as of 20:46, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024409 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
658 nt |
Genomic location |
chr11+:117280528..117282580 |
Exon number |
3 |
Exons |
117280528..117280681,117281544..117281610,117282144..117282580 |
Genome context |
|
Sequence |
000001 TATGGCTCCC TGGCCAGGTT CTCAGCCTTA TCATCTGCTA CACCCACGTC CACCCAATGG GCCTGGGATT CAGGGCAGGG 000080
000081 GCCCAGGCTC CCCTCCTCTG TGGCTCAAAC GGTGGACGAC TTCCTGTTGG AGAAGTGGCG CAAGTATTTT CCATCTGGCA 000160 000161 TCCCGCTGCT CAGCAACAGC CCCACCCCGC TGGAGAGCAG GCTGGGTTAC ATGTCTGCCA GGCAGCTAAC AGTGAGTACC 000240 000241 CCCCACTAAC CCTTTGGCCA ACTTGAGAGC TGATGCTGGC CAAGGATTGA GTTGACAGAG GGGAGCGCTT TGCTGATGAG 000320 000321 ATTGGCGGGA GCAGGCGGAT GTGGGAGCCC AGAGCCTTGT ATCAGTAGCA CCCAGCAAGG GGGCAGAGGG CCTCCACCAC 000400 000401 TTTCCCGTTT GGGAACTGTT CTGGAGGGGC AGATGTTTTG AAGCTTTGAA TTGCTAGGGA CCTCGGAGAA GCTGCTCTGG 000480 000481 TAGCTGAGAG AAAGAGGGAG GAGGTGACAG ATGTGATGGC CTCTGTGCAT CCTCTGTCAC TTCCGCGCCT CCTCTCTCCC 000560 000561 CTCGCCATGC TCTCCTCTTC CTTCCCAGTG AGCAGCTCCG GCTCCTACAG CACTCCCATT CGCAAGTCCC TGAGGCGGGC 000640 000641 AGCACCACCT TTCAGGGC |
Predicted Small Protein
Name | NONHSAT024409_smProtein_56:265 |
Length | 70 |
Molecular weight | 7188.0654 |
Aromaticity | 0.0724637681159 |
Instability index | 41.1550724638 |
Isoelectric point | 6.22113037109 |
Runs | 8 |
Runs residual | 0.0233892954513 |
Runs probability | 0.0404742978273 |
Amino acid sequence | MGLGFRAGAQAPLLCGSNGGRLPVGEVAQVFSIWHPAAQQQPHPAGEQAGLHVCQAANSE YPPLTLWPT |
Secondary structure | LLLLLLLLLLLLEEELLLLLLLLLLLEEEEEEEELLLLLLLLLLLLLLLLLEEHHHLLLL LLLLLLLLL |
PRMN | - |
PiMo | - |