NONHSAT024409

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT024409

Source

NONCODE4.0

Same with

,

Classification

sense

Length

658 nt

Genomic location

chr11+:117280528..117282580

Exon number

3

Exons

117280528..117280681,117281544..117281610,117282144..117282580

Genome context

Sequence
000001 TATGGCTCCC TGGCCAGGTT CTCAGCCTTA TCATCTGCTA CACCCACGTC CACCCAATGG GCCTGGGATT CAGGGCAGGG 000080
000081 GCCCAGGCTC CCCTCCTCTG TGGCTCAAAC GGTGGACGAC TTCCTGTTGG AGAAGTGGCG CAAGTATTTT CCATCTGGCA 000160
000161 TCCCGCTGCT CAGCAACAGC CCCACCCCGC TGGAGAGCAG GCTGGGTTAC ATGTCTGCCA GGCAGCTAAC AGTGAGTACC 000240
000241 CCCCACTAAC CCTTTGGCCA ACTTGAGAGC TGATGCTGGC CAAGGATTGA GTTGACAGAG GGGAGCGCTT TGCTGATGAG 000320
000321 ATTGGCGGGA GCAGGCGGAT GTGGGAGCCC AGAGCCTTGT ATCAGTAGCA CCCAGCAAGG GGGCAGAGGG CCTCCACCAC 000400
000401 TTTCCCGTTT GGGAACTGTT CTGGAGGGGC AGATGTTTTG AAGCTTTGAA TTGCTAGGGA CCTCGGAGAA GCTGCTCTGG 000480
000481 TAGCTGAGAG AAAGAGGGAG GAGGTGACAG ATGTGATGGC CTCTGTGCAT CCTCTGTCAC TTCCGCGCCT CCTCTCTCCC 000560
000561 CTCGCCATGC TCTCCTCTTC CTTCCCAGTG AGCAGCTCCG GCTCCTACAG CACTCCCATT CGCAAGTCCC TGAGGCGGGC 000640
000641 AGCACCACCT TTCAGGGC
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Predicted Small Protein

Name NONHSAT024409_smProtein_56:265
Length 70
Molecular weight 7188.0654
Aromaticity 0.0724637681159
Instability index 41.1550724638
Isoelectric point 6.22113037109
Runs 8
Runs residual 0.0233892954513
Runs probability 0.0404742978273
Amino acid sequence MGLGFRAGAQAPLLCGSNGGRLPVGEVAQVFSIWHPAAQQQPHPAGEQAGLHVCQAANSE
YPPLTLWPT
Secondary structure LLLLLLLLLLLLEEELLLLLLLLLLLEEEEEEEELLLLLLLLLLLLLLLLLEEHHHLLLL
LLLLLLLLL
PRMN -
PiMo -