NONHSAT024476
Revision as of 20:46, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024476 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1147 nt |
Genomic location |
chr11+:118302388..118303534 |
Exon number |
1 |
Exons |
118302388..118303534 |
Genome context |
|
Sequence |
000001 GGAGAAAGGA GCACTTTTAT TTATCTATTA tttattttat tttattttat tttattAATT AATTAttttt tttctttttc 000080
000081 tgagacaagg tctcatctca ctctcttgcc caggctagag tgcagtggcc tgatctcagc tcactgcagc ctcagccacc 000160 000161 tcagctccac tagcagctgg gactacaggc acatgccaag tttcccaggc tggtctcaaa ctcctgagct caagatcctc 000240 000241 ccatctcagc ctcccgaagt cctggaatta TGAAAGAGGC ACTCTTtttt tcttcttctt tttttttttt ttttttgaga 000320 000321 cactcttctc cgtcttccag gttagagtgc agtggggtga ttttggctca ttgcaacctc cacctccccg gttcaagtga 000400 000401 ttctggtgcc tcagcctcct gagtagctag gactacaggt gtgtgccacc acgccaggct aatttttcta tttttagtag 000480 000481 agacggagtt ttgccatgtt ggccaggttg atctcgaacc cctgacctca ggtgatttgc ccacctctgc ctcccagaag 000560 000561 tgttggaatt acagtcatga gccactgcac ccagccaaaa ggcactctag aacattgctg gtgggagtat gaattagcat 000640 000641 aacctttacc ggggacaact tggcactgtc tattaaaact acaaatgtac ataccttttg actcagcaac tgctcttcta 000720 000721 gaaatctata ctacagatac atttgaacat ttgcaaaatg acgtatatta aaggttatgc actgcagcat tgtgtgaaat 000800 000801 acatgcaaca gattggaaac aactcaagtg cccaccgata gagaactgat taaagtaagc tctatctcta ttccatacag 000880 000881 ccccaataat gaggaaactg tctacttata gtaatatttc caagatataa gtgaaataag caagattcag gaaattggtt 000960 000961 tgatatgctt ttatttatgc aaaaaCTTCT ATATGTGTAT GCTTTTGTAG GCATAGACTA TGTATGGAAG AATATACAAT 001040 001041 AGACTGATAA CAGTTACTCC TACTAAAGGG TAAGTAATAT TACTGAGGTT GGGGAGAGGA TGATTCAGAG CAAAAATAAA 001120 001121 GTGAGGACTT TAAGGACTTT AATTCCT |
Predicted Small Protein
Name | NONHSAT024476_smProtein_269:421 |
Length | 51 |
Molecular weight | 5398.0283 |
Aromaticity | 0.14 |
Instability index | 70.204 |
Isoelectric point | 6.80401611328 |
Runs | 8 |
Runs residual | 0.0046783625731 |
Runs probability | 0.0276452923511 |
Amino acid sequence | MKEALFFSSSFFFFFLRHSSPSSRLECSGVILAHCNLHLPGSSDSGASAS |
Secondary structure | LEEEEEEEEEEEEEEEELLLLLLLEEELLLEEHHHLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |