NONHSAT024567

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT024567

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1602 nt

Genomic location

chr11+:118928171..118929772

Exon number

1

Exons

118928171..118929772

Genome context

Sequence
000001 GGCGCTGGAT GCTTTGCTGC CGGGGTTCGG GAGTGACCTG CGCCTAGAGC AGGTCGGGCG CACTGCAGTC CCGCACTCGG 000080
000081 GGCTCTTCTT CCGGTCACCT GTAGAGCCCG GCCGAGGAAT GGAATAACAG GCGTCCTGTC CGCAGCCCCG CGGAGGGGGC 000160
000161 GCTGGCCTGC CGGTTAGTAT TGAGGTGCCC TAGGCTTTGG ATAGACGTTG GAGAATGGCT GTCCCTCGGA CTGAGTCCGT 000240
000241 CGcaaccccc tctgttttac tgaggaaact gaagccacag aaaAAGATGT TTGCTGATGG GTCAGAGATA ACCGATGCAT 000320
000321 TCGTCGCAGA ATCTGGCCAG GATTTCTTAG GTTAAGCCCC ACTCATTTGT ATAAGAAAGA ATATTCCAAA CTTAAGTACT 000400
000401 ACACACAAAA GACACTTTTA TTTGTGAGGC TATAGTTGGT TGAGCTTGTG TGCACCTTCT CCTATTTCTG TTCTATTAAA 000480
000481 TCTTGTGAAC ATTTCTCTAC TCTTTAGCTG TTTCTGTCAT AGAATGACAG AAGCACCTCA CTGCCTTCTC TTTTAACTTA 000560
000561 CAGCTCCATA GAAATGTGCG CAGTCGCccg ggcgcggtgg ctcacgcctg taatcccagc attttgggag gccaaggcgg 000640
000641 gcgaatcact ggaggtcagg agttcgagac cagcctggcc aacatggtga aaccccgtct ctaccaaaac tacaaaaatt 000720
000721 agccaggcgt ggtggcgggt gcctgtaatc ccagctactc acgaggctga ggcaggagaa ttgcttgaat ccgggaggca 000800
000801 gaggttgctg tgagcccaga ctgcgccact gcactccagc ctgggcgaca acagcgagac tccttctcga aaaagaaaTG 000880
000881 TACGCAGTCC TTGGAGACTG CATTTTCCTT AAGTGTGGAT GGAAATAAGT CATCTGTTTT CTCTCCTACT AAGTTGATGC 000960
000961 CTGGCCACCC TTCACAGAAA GGCCCGCTTG AAGACCCTGG CTGTCAGGGC CAGGGTTGTG TCAAGCCTGA ACTTGTTTAA 001040
001041 GGAGCTCTTA GCTCTTCCTT TCTCTACATT TTTCGTGATG CTTAGGTGGA GAGTGGTCCG GTGTCTATGC TTAGAAGGAA 001120
001121 AAATTATTGG CAGTCCCAGA GAGAGTCTAT TCTTCCTTtt tttttttttt ttttttttat tgatcattct tgggtgtttc 001200
001201 tggcagaggg ggatttggca gggtcatagg acaatagtgg agggaaggtc agcagataaa caagtgaaca aaggtctctg 001280
001281 gctttcctag gcagaggacc ctgcggcctt ccgcagtgtt tgtgtccctg ggtacttgag attagggagt ggtgatgact 001360
001361 cctaacgagc atgctgcctt caagcatctg tttaacaaag cacatcttgc accgccctta atccatttaa ccctgagtgg 001440
001441 acacagcaca tgtttcagag agcacagggt tgggggtaag gtcatagatc aacagcatcc caaggcagaa gaatttttct 001520
001521 tagtacagaa caaaatgaag tctcccatgt ctacttcttt ccacacagac acagcaacaa tccgatctct atcttttccc 001600
001601 ca
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Predicted Small Protein

Name NONHSAT024567_smProtein_1106:1228
Length 41
Molecular weight 4934.5866
Aromaticity 0.275
Instability index 59.23
Isoelectric point 6.51898193359
Runs 8
Runs residual 0.0219758064516
Runs probability 0.0700075075076
Amino acid sequence MLRRKNYWQSQRESILPFFFFFFFIDHSWVFLAEGDLAGS
Secondary structure LLLLLLLHHHHHHHHLHHHHEEEEELLLLEEEEEELLLLL
PRMN LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLL
PiMo iiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooo