NONHSAT024657
Revision as of 20:47, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024657 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
681 nt |
Genomic location |
chr11+:119239299..119242802 |
Exon number |
2 |
Exons |
119239299..119239327,119242151..119242802 |
Genome context |
|
Sequence |
000001 CAGCAGCCCC AGTGGCAAAT AGGACCCAGT GGATCCAGCC CTGCCTTGTC AAGTTCTGAA TGTTCTGGGA GGCACCAGCG 000080
000081 TTTCTATCTC CTGTGCCACT TCACAGATGG CACAACAAAG CCAAGACTCC CTAAGTCATA TTATCAAAGT TGCTCTCTCA 000160 000161 AGACCTTTAG TTATGCAAGC TTCAAGGTCC TGCCCCTATT CCTGAACCCC TGCTGCATTT GTCTGGATCA GCCCTCCAAG 000240 000241 CAGTATTTCT TGCTGTGGCA TGCTGTTGTT TTCAAAATGT ATTTGTCCTA GGAGTAGGGA GGGGTACATA AGGTAATGGA 000320 000321 GGAGACACAG CATCCAGCCC TTCTGCCCAT ATGCTTGCCT Gtccatctgt ccacccgcca tctacccgtg tatccaccca 000400 000401 cccaccaccc acacatccat ccatccattc atccCTGCAA TCAGCAGGTC AGCCCCCATT GTGGGAGGCA CGTGGCAGGG 000480 000481 GATCTAGAGA TAGGATTTCT TTTTCCTCCT CTGAGAGCTT GCCACCTAAT GGGCACACTA ATAACTACAG AAAAGGCAGA 000560 000561 TGTCGTCAGT GCCCCAAGAG AGGCGTGTGC GGGCATTAGT TGGCGAGCGA GCCCATGCCA GCCCTTGGTC AGTCTCCAGC 000640 000641 AGAGCCTCTT CCCTCATTCC AGCTGAGGCA GGGCTGGAAT A |
Predicted Small Protein
Name | NONHSAT024657_smProtein_350:598 |
Length | 83 |
Molecular weight | 8933.9366 |
Aromaticity | 0.0365853658537 |
Instability index | 63.8841463415 |
Isoelectric point | 10.7709350586 |
Runs | 9 |
Runs residual | 0.0261456023651 |
Runs probability | 0.0287248032347 |
Amino acid sequence | MLACPSVHPPSTRVSTHPPPTHPSIHSSLQSAGQPPLWEARGRGSRDRISFSSSESLPPN GHTNNYRKGRCRQCPKRGVCGH |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHLLLLLLLLLLLLLLLLLLEEEELLLLLLLLL LLLLLLLLLLEEELLLLLEELL |
PRMN | - |
PiMo | - |