NONHSAT024715

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT024715

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1227 nt

Genomic location

chr11-:119983118..119988749

Exon number

3

Exons

119983118..119983184,119986046..119986122,119987667..119988749

Genome context

Sequence
000001 CTGGGCCACA TCAGCGTTTC CCAGGGCTTG TTTCACCGCT CTCTAGTCTC TAACTACACG CTGCAACAAC AGCTCTCAGT 000080
000081 GGTCAGGACC GGGGGACATG CCATACCCCC TGCACTCGAC CTCTCTGATC CTCAGGATGC TGCTTCTCCT ACTGCAGAGT 000160
000161 TTATTTAACT CCCAGCGTTG GCTGGCTCTA GGGTCCTGTG GCCATGGGGC ACCTGCCAGC ATCCTGCAGA TCCAATCCTG 000240
000241 CAGGCGCCCC TTTGGGAAAG GCAGGACCAG ACGACCCTAA GTCCCCCCAA GGCTGATCCT CTTTTCCTGC ACTCTGTCCC 000320
000321 CCGCCTGCCT GTGGTGCTCC CAGCACTCTG ACAAGGCAGA GTGATTGACG CCTCCTGTCC CCTGGGGTTG GGGGCATCCT 000400
000401 GAGGGGGCAG GCTTGAACCA GACTCTGGCT ATGGGCCCCA GACCCTCATG TATCTCCTGA AAGATCCCAG GGACAGCTCT 000480
000481 AATGGCTGTG GTGGGAGTAA CCCTGTCTCT CTTCTGGCAC CCCAAACATC TGGCCTGGAA GTCAAGATCA GCACATTGGG 000560
000561 TGGGCTCAGG AGAGGGAAAG GGGCTATGCA GGGCAGAGAG ACCCCTGAAC AGTGGTCTCT GAGGCCTCAT CACTCAGTTG 000640
000641 TCCCTTCCGG CCCAGGGTCC TATACTATAC CCAGGACAGG GATTCTTGGA GCTGCCGGCA AGAGGGAGGA GACAGGACTA 000720
000721 TGGGTGGAGG GTCCCAGCCT GCAGGAGCCC CGGGCATGTC TTAGCTCTGA TCCGGGCCTG GGGAGCTCCA GGACTTGCCT 000800
000801 TGGCCTGTTT GGCTTCTAGC AGGCGCCTTT CTGCTCTCTG CTCAAGCCTG GCCCACAGAG CACCTGGCAG GGGAGGTGGC 000880
000881 CGCTCTCAGG TGTGATTCAG AGCAGCCCCC AGAATGAGGT GTGGGTCCTT TTGGCCCCTC TGGGACCAGC GCTGTGCCAC 000960
000961 TAATGCCTCT CTCTCTCCCA GCAGGCACTG GGAAAACCCC TTATCAGTTC ACCACCTTGG GACAGGCCAC TGCAGAGTTT 001040
001041 TCCAAACCAC TGGGTCGCAG TGGGCTGTCT AAAAATAATC CCGGCTATCC CTCCCTCATG CGGAGCCAAA GCCCCAAGGC 001120
001121 CCAGCCCCAG ACTTGGAAAT CTGGCAAGCA GACTATGCTG TCTCACTACC GGCCATTCTA CGTCAACAAA GGCAACGGGA 001200
001201 TTGGGTCCAA CGAAGCCCCA TGAGCTC
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Predicted Small Protein

Name NONHSAT024715_smProtein_962:1222
Length 87
Molecular weight 9272.3927
Aromaticity 0.093023255814
Instability index 55.0989534884
Isoelectric point 10.2345581055
Runs 11
Runs residual 0.0117146824019
Runs probability 0.0416486004721
Amino acid sequence MPLSLPAGTGKTPYQFTTLGQATAEFSKPLGRSGLSKNNPGYPSLMRSQSPKAQPQTWKS
GKQTMLSHYRPFYVNKGNGIGSNEAP
Secondary structure LLLLLLLLLLLLLLEEELLHHHHHHHLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLL
LLEEEEEELEEEEEELLLLLLLLLLL
PRMN -
PiMo -