NONHSAT024761

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT024761

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1135 nt

Genomic location

chr11-:121899037..121971159

Exon number

5

Exons

121899037..121899553,121904022..121904170,121934888..121934979,121936844..121937142,121971082..121971159

Genome context

Sequence
000001 ACTGAGAGCT CTCATTTTCC CCCCTTGCTC GGGATGGTGC CACAGGAGGC TGTGCGGGCC CCGCTCCGCT TCGAATGGAT 000080
000081 ACAGTTAAGC TAATGATCTC GAGAGGATAT CGTCCTGGAT AAGGGTGGAG CCTACGCCCA AAAACAAGAT TACCTGAAAG 000160
000161 AGAAAAGAAA GGGGGAAAAC ACACAGAGAT ACAGTCGGGG AGGCCACATG AAGATGGAGG CAGAGACAGG AGTGATGAGC 000240
000241 CTGCAAGCCA AGGAATGCCA AGGGCTGCCA GCAGCCATGA GAAGCTGAGA GACACAGAGA ACGAGTCCTC TGCCAGAGCC 000320
000321 TCCAGAAGGA ACTAACCCTG TCAATACCTT GATTTCGGAC TTCTGGACTC CAGAACTATA ACCCTCCTTC CTCCACCTCA 000400
000401 CAAAAACTCA CAAGCTGCAA CCCTTCTGAT GTCCACTCCC ACACAAACCA GCTTCAGGCC TTTTTCAAGT GGATGCTGTG 000480
000481 GGGCACCACC TCCTTGAGGA CCAAGGCACT CCAGCTGCCA GGAATTTGGC TGCTAACCTC ACACAGCTGA GCCTTCCATG 000560
000561 AAAATTGCTC TCTGCCAAAG AGAACTTCCT AGTCCAAGGT CATGTCTACT CTCCAGAGAT GTGACTGGAG TGATTTGCAC 000640
000641 CCGGATGCCT AGACTCGCCA TCTGCTCAAA GACTGCTCAG AAAGCCCTCC CATGCATTCC CCTGCTGCAT ACCAGCCCAC 000720
000721 TCTGCCTGCA GCTGCTGTCT GCAGGACTTC ATATCTATGC CACACTGTGT AAAAGCTGTG CTTCAAGAAA TCACAAAAAC 000800
000801 ATTTTCCTGC ACCTACTACA CAGCCTGAGT GCGGCATAAG TTGACCTTGC TTGCTAAGAA ATGGGGCAAG AAATGCTTTT 000880
000881 TTGTGTGTGT CATGTCTGTT TGTTTTTCAA TTAAGAGAGG AAAGCATTAG GCAGATGGAA TGTACATGTG AGGATGAGGA 000960
000961 GACAGAAAAC AAGTAGCCCT TTCCATCAAG ATAGAGGGTT TTCTGGGGTT GCTGGCTATT GAATGTCACT CCTGATTTCT 001040
001041 CTTTCCAAGG CACTGTACCA CCAGCCTACT GAGATTGTGT GGGAGCTTTC ATGGGGGTTG TATTTCACTG ATGAAAATAA 001120
001121 ATTTTTTGCA TAATG
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Predicted Small Protein

Name NONHSAT024761_smProtein_557:838
Length 94
Molecular weight 10163.1957
Aromaticity 0.0215053763441
Instability index 66.076344086
Isoelectric point 9.57904052734
Runs 16
Runs residual 0.0411190760653
Runs probability 0.0348823087793
Amino acid sequence MKIALCQRELPSPRSCLLSRDVTGVICTRMPRLAICSKTAQKALPCIPLLHTSPLCLQLL
SAGLHIYATLCKSCASRNHKNIFLHLLHSLSAA
Secondary structure LLEEHHHLLLLLLLLEELLLLLLEEEELLLLHHHHHHHHHHHHLLLLLLLLLLHHHHHHH
HHLLHHHHHHHHHHHHHLHHHHHHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHH
HHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTT
TTTTTTToooooooooooooooooooooooooo