NONHSAT025145

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT025145

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1795 nt

Genomic location

chr11-:130659126..130660920

Exon number

1

Exons

130659126..130660920

Genome context

Sequence
000001 tgcatgaaca aaatgaaaac ttcaccaaag agaaataata gaaaagaact aaacagaaat tctggagctc agcaatacaa 000080
000081 tgaatgaaat gaaaaatgtg atagagagcc tcaacagcag acttaagcag aagaactaat ctgcaaactc aaaATTAAGA 000160
000161 AGGTGCTGTC ACTCCCAGTT GCCAAGTCAA GCCCCGTCGA AGGAAAAGCA TGCATAGAAC CAAGCACAGC CAAAATTTCT 000240
000241 TTCCCAGGAT CAGCACCTCC TTCTGAGGCT GCAGACAAAG ACTGTCAAGG GACCCCATTA CTCCCTGTTG AAGTCTCAGA 000320
000321 GCTCATGGGT GTAGCTTCTT TGGTGTCAGG GGCTCTGGAT GCTAAGCCAG TAGAGAATCC TGAAGATCCT AGCCAACGGA 000400
000401 TTAATAAAAA CTGGAAGAAG GCAATTGTGA CATGGCAGGA ACAAACTGAG AGAATATTTA TATTTTGAAG TAGATGGATC 000480
000481 CAAACAAAGA AATGTGAATA AGATCAAGGA GTTTGGCTAG GGGTCTGAGA GACACTGTCA GACCAACCTG CATTTGAAAT 000560
000561 GGGCCAGTGT CTGAGTCATG ACAACATAAA GGTAAAGGTG CCCTGAATGT GCCCCTAGTC CCTGGGTCTG CTCTCGTCAC 000640
000641 CTCTTGTCAC TTCAGGAAGC AACAGCCAGG AGTGAAACAT GTAACCTGAG GTGGGAGGAA GGAATTTTTC AGAAGCTCTT 000720
000721 CCTGGACAAG GTGAGTCCTC ATGAACTGAT CCTGACCCCT ATGAACCCAT ACCCTATGAG CTCAACCTCC TAGATGAGGA 000800
000801 GCGTTCCACG AATAAGACCC ATATGTTAAG ATCCTGGAGC CTGAGGGATC AGGTGGCCTG ATGGGGCAGA CAGTTCTAAG 000880
000881 TTGCCTCCTG TTTTGGCCAA TCTTCTGGGA AGCATAGGTA CCTGGAAGGG TTTATTGAGA TCTGAAGAAG AAGGCATCAA 000960
000961 TGTCCAGGAG AGCCTTACTT TCATCATGGG TAGCCCAAAC AGTCAGCCCT CAAAATAACT TCTAAAACAA CCAGACTATT 001040
001041 CAGATAAGAT GACTGATTGC TCTTGCCACC TAACCTCTGA GGTCCTGGTT GAATAGTCCG TCGTTTCCTA CCAGGAGGCC 001120
001121 CTGGGAGGTC CAAAGACATT TTCCCCCTGG CACTGGCGAC CTATACCTGG TTTCTATGGA GGCTCTGGAG ACCCTGATGG 001200
001201 GCAGTTGATC CACATCTTCT GGGTCCCCCA ATCCCTCCAG TGAAAGATGA CCCCTTCTGG GATAGCCCAG GTGACCCCAT 001280
001281 GCAGGGTGGC CTAATATTGA GGGGAGAGTC AAGAACCAAT TCCTGGATCA TACCATAAAG CCTGTGGTGG CCAAAAAGAA 001360
001361 AATGAACCTT TCCCACCTCC TCCACTCTGA GGGGCCAGAG GAAGTCTCTC TGGAGTAGGA CCCCTAAATG GATGAAGAAA 001440
001441 TTCTGGTGGG ATCATTGTTA GAGTTGGTGG GCATCATCAC CAATAAGCAT CTCTTTCATG AAAGTACTGG TGGTGGCATA 001520
001521 AGTGGGGGCA GTGAAGATTT TTCATGAAGG TCCTGGACAT GGGGGATGCT GTGACCCCAA GCCTCATGAT GTCCCTGGTC 001600
001601 ACTGAGGCCA TGACCATCAA GGTCTGCCCT CTCGTGAGCA CTCTGGCCAT GATGGCCCTG GGCCACTGAG GTCAAGATGG 001680
001681 AAGCTACAGC CATGAAGGAG ACAGATCAAC CTGCTCTGTT TGCTGACATT TGATGATAAA GGGCAATGCC ACTATGAGAA 001760
001761 CAATTACGTC TTTTACCACC TGAGTGTCAA AGTCC
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Predicted Small Protein

Name NONHSAT025145_smProtein_1427:1546
Length 40
Molecular weight 4089.491
Aromaticity 0.0512820512821
Instability index 41.6871794872
Isoelectric point 4.24224853516
Runs 7
Runs residual 0.0107466063348
Runs probability 0.0328059151588
Amino acid sequence MDEEILVGSLLELVGIITNKHLFHESTGGGISGGSEDFS
Secondary structure LLLEEEEHHHHHHHHHEELLLEEEELLLLLLLLLLLLLL
PRMN -
PiMo -