NONHSAT025472
Revision as of 20:50, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT025472 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1074 nt |
Genomic location |
chr12-:2881025..2903060 |
Exon number |
3 |
Exons |
2881025..2881073,2896508..2896653,2902182..2903060 |
Genome context |
|
Sequence |
000001 gacagggtct tgctctgtcg cccaggctgc agtgcggtgg tgcgatcttg gctctctgta gccgggacta caggcgtccg 000080
000081 ccaccacgcc gactaatttt tgtattttta gtagagacgg ggtttcgcca tgttgcccag gctggtctcg aacatctggt 000160 000161 ctcaaatgat ccgcccgcct cggcctccca aagttctcgg attacaggcg tgagccactg cgcccagccT GAATTTTTAT 000240 000241 TCCAATAATA ACTGTATTTT TGGACTTCCC GTTATGTGCC CGGCACTGTG CGATTGGACG CCATTAGTCT CATCAAACTA 000320 000321 AATTGAAAGC TTTTTAGAGA TGAACTTTCA GCGTCATAAT GTGATGATTT ATTGTAGTCC CTGCCGACGG AACTTGAAAG 000400 000401 GGATGCAGAA GAAAAAGCCC TTCGCTTCAG CAATTTACAG CCCAAATGAG TTGAGCCATA ATGAAGACGT CTCTTTAGGT 000480 000481 GGCTGGAGAC AGCTTCAGAG GATACGGGGC GCTGCCTCTG TAGGGGTTAA ATCCACTACT TTTATGCAGA AGTAACAGTG 000560 000561 CCAGGGGTCA CCCAAACTCC GGGAGACCAG GATGGTGGGT GCTGGCTTCC GGGGTGGCAG TTTACCGCAA ACTGTCCTTG 000640 000641 GCTTGCACCT ACTGATTCTC CACGTGTGGC GGTTTCTTTT CTGCGTCTTT TTCTTCATCG GAAGCGGACA GTGTGGGACC 000720 000721 CCCCCTTTAA TTCTGTTCGG CACGTACATA GTGGAGCCCT TCAGATTGCC TGCCGTTACA TTAACACATA GCCTAATACC 000800 000801 CTagtggaat gagcatgtgc tttggagtaa gggacgttgg gcggcccatg tgttatgtta gctgtttaaa ttggggcagT 000880 000881 GAATCTGATG TCAGCAAATC ACAGAAGAAA AGAGATGCTG CTGACAAACC AAGAGGATTT GCCACAGGTC TTGATCCTGA 000960 000961 AAGAGTAATT GGTGCCACAG ATGGCAGCGG AAAATGGATG TTTCTCATGA GGTGGAAAGA TTCAGAATGA AGAAGATACC 001040 001041 CAGCAGATGT GTGCCAAGAT TCTACAAATG GTAC |
Predicted Small Protein
Name | NONHSAT025472_smProtein_887:967 |
Length | 27 |
Molecular weight | 3107.6065 |
Aromaticity | 0.0 |
Instability index | 70.7384615385 |
Isoelectric point | 6.54119873047 |
Runs | 6 |
Runs residual | 0.0214669051878 |
Runs probability | 0.0257168933639 |
Amino acid sequence | MSANHRRKEMLLTNQEDLPQVLILKE |
Secondary structure | LLLLHHHHHHHHLLLLLLHHHHEELL |
PRMN | - |
PiMo | - |