NONHSAT026857

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT026857

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1681 nt

Genomic location

chr12+:10124104..10148293

Exon number

5

Exons

10124104..10124286,10131565..10132123,10133181..10133332,10134619..10134728,10147617..10148293

Genome context

Sequence
000001 AAATTATAGG TCCTGTTTAA CATTCAGCTC TGTTAACTCA CTCATCTTTT TGTGTTTTTA CACTTTGTCA AGATTTCTTT 000080
000081 ACATATTCAT CAATGTCTGA AGAAGTTACT TATGCAGATC TTCAATTCCA GAACTCCAGT GAGATGGAAA AAATCCCAGA 000160
000161 AATTGGCAAA TTTGGGGAAA AAGCACCTCC AGCTCCCTCT CATGTATGGC GTCCAGCAGC CTTGTTTCTG ACTCTTCTGT 000240
000241 GCCTTCTGTT GCTCATTGGA TTGGGAGTCT TGGCAAGCAT GTGTATGTAC TGCCCCTGTT TTTGTCAAGA GGAAGTATCT 000320
000321 AGAATTTCAA ATATTTAGCA ACAAAAGTTT ATTCCTTCAG TGGAAGATTT ATAATAATGA TAGGTGATAG GCCCACAAGG 000400
000401 AGGACTTACA ATGTGGAACT TAGTCTCTTT CCCTCACTCC TGTAGAGTAA TTGCTTTCCC TACCCCTTTA ATCTTTATAC 000480
000481 TACTTCTGCA AATGATAAAG GATGATGGCT CTATTGAGAA TTTACAATTT TTTGTCATTT TTTTAATGTG GAGTTCACGT 000560
000561 AACTTTGAAG ATAGAAATGA AAAAAATGAA CAAACTACAA AACATCAGTG AAGAGCTCCA GAGAAATATT TCTCTACAAC 000640
000641 TGATGAGTAA CATGAATATC TCCAACAAGA TCAGGAACCT CTCCACCACA CTGCAAACAA TAGCCACCAA ATTATGTCGT 000720
000721 GAGCTATATA GCAAAGAACA AGAGCACAAA TGTAAGCCTT GTCCAAGGAG ATGGATTTGG CATAAGGACA GCTGTTATTT 000800
000801 CCTAAGTGAT GATGTCCAAA CATGGCAGGA GAGTAAAATG GCCTGTGCTG CTCAGAATGC CAGCCTGTTG AAGATAAACA 000880
000881 ACAAAAATGC ATTGGAATTT ATAAAATCCC AGAGTAGATC ATATGACTAT TGGCTGGGAT TATCTCCTGA AGAAGATTCC 000960
000961 ACTCGTGGTA TGAGAGTGGA TAATATAATC AACTCCTCTG CCTGCAGGTA AGTGACCCAG CTGCTGCTTC TATAACCCAT 001040
001041 AGTAGTGACT TGGACTGAGA GAAGAGGGAA TCTCAAGAAT AAGAGTTTCC AGTACTCCCT CCTATTCTAA GTGTCCAGTG 001120
001121 ACTTACATAT TTTCTGAGAT AACCGAGCCA TCCTCCCACT TCCAGACCTC ATTCGACTTC TGGCGAGATA ATCCGACCCA 001200
001201 ACGAATTAAA TGAGTCCTGG CTTTGATGTA CTCCTATTGT AAACATAAAT AAACACAATG GTCAGAATCC CTCCACAGCT 001280
001281 CTTGGTATGA TAGACAAAGC TTCATGATAA GACGTTGGAC AAAAAATGTT GGATTACATG TCTATATTAG TATTAATGGA 001360
001361 TTACATTTGA TGTTTGAAAT TGTACCAATT TGACTTGTCT GAGAACTTAA AAAAAACTTA TAGGACACAG GTAAAATTGT 001440
001441 ACACAAAATA GCTGATATTC TAATCTTCTT TTGTGTTTAT AACATGTATT TAGATCTTCA ACCAGTTGAG GATTATACTC 001520
001521 CCAAATAGAA TACCAAATAT GATTCAAAGG AATAAATGTA AACAGAGAAA GGAAATACAA AGAAATACAT TGTTGATGAG 001600
001601 CTGTATATTC CTTAGAGTTA AAGCCCTACC TGCTTTGGTT TTATTGCTCA GCTTGCCTAT AAAATCTTAC ATATGGAAGT 001680
001681 A
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Predicted Small Protein

Name NONHSAT026857_smProtein_92:337
Length 82
Molecular weight 9010.5434
Aromaticity 0.0864197530864
Instability index 72.212345679
Isoelectric point 4.71514892578
Runs 14
Runs residual 0.0306597988717
Runs probability 0.042666616196
Amino acid sequence MSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIGLGVL
ASMCMYCPCFCQEEVSRISNI
Secondary structure LLLEEEEHHHHLLLLLHHHHLHHHLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHLLHH
HHHHLLLLLLLHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH
HHHLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTT
TTToooooooooooooooooo