NONHSAT026862
Revision as of 20:54, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026862 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
803 nt |
Genomic location |
chr12+:10213198..10215781 |
Exon number |
2 |
Exons |
10213198..10213872,10215654..10215781 |
Genome context |
|
Sequence |
000001 ctgatggtag tggaggagcc gagtatcttg attgtatcaa tgtcaatatc ctggttgtgc tattgaacta aattttgcat 000080
000081 gtctatgtac tgatatggaa ctgagttcaa atatgcatgt taatgataaa acaaaaggtg caaaaccatg taaatatatt 000160 000161 gttaccattt gtgtTAAGGG GAGAGAGCGA GTTTTATATT CATTTGCCTT CATTTGTAAA GTTTCTTTTT GTTTTATCTT 000240 000241 ATGTGTAATA TTCAAAAGCT CCCAAATAAT AAAATATAAA TTGGTAAATC TGGTTGTTTG GGGGTAGTAA ATCAAGCAAA 000320 000321 TTAAAAATGG GTGCAAAGAG ACATTTTGTT CCACGTCTTT TGTAGTGTTT GATTCTTGTA CAATGTAAAT TTTAAGCAAA 000400 000401 AACCTAAAAT AATACAAATT CAAGTCTCAA AAATAATAGT AATTTGTACT TGTCTTTAGT CTGTGTTGAA GGATTATTTT 000480 000481 GCTATAAAAT GTCAGGATTT TATTAGGAAT GATTGCTATC ATGTGAAGTG TTGCAGGTGT CCACCATTGC GATGCAGCAG 000560 000561 CAAGAAAAAC TCATCCAACA AGAGAGGGCA CTGCTAAACT TTACAGAATG GAAGAGAAGC TGTGCCCTTC AGATGAAATA 000640 000641 TTGCCAAGCC TTCATGCAAA ACTCATTAAG TTCAGCCCAT AACAGCAGTC CTTGTCCAAA CAATTGGATT CAGAACAGAG 000720 000721 AAAGTTGTTA CTATGTCTCT GAAATTTGGA GCATTTGGCA CACCAGTCAA GAGAATTGTT TAAAGGAAGG TTCCACGCTG 000800 000801 CTA |
Predicted Small Protein
Name | NONHSAT026862_smProtein_116:247 |
Length | 44 |
Molecular weight | 5139.1711 |
Aromaticity | 0.162790697674 |
Instability index | 63.4211627907 |
Isoelectric point | 9.39910888672 |
Runs | 10 |
Runs residual | 0.0752547687484 |
Runs probability | 0.0583289171525 |
Amino acid sequence | MLMIKQKVQNHVNILLPFVLRGESEFYIHLPSFVKFLFVLSYV |
Secondary structure | LLLHHHHHHHHHHHLHHHLLLLLLEEEEELHHHHHEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTo |