NONHSAT027012
Revision as of 20:54, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027012 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
832 nt |
Genomic location |
chr12+:13044513..13066067 |
Exon number |
3 |
Exons |
13044513..13044598,13065018..13065076,13065381..13066067 |
Genome context |
|
Sequence |
000001 TCTCCCCCAG CACTGAGGAG CTCGCCTGCT GCCCTCTTGC GCGCGGGAAG CAGCACCAAG TTCACGGCCA ACGCCTTGGC 000080
000081 ACTAGGGTTT TGAAGAGACA GGGGACACGC TCTATGCCCC CTATTCCACA CATTTTCAGC TGCAGAACCA GCCTCCCCAA 000160 000161 AAGGAATTCT CCATCCCACG GGCCCACGCT TGGCCGAGCC CTTACAAAGA CTATGAAGTA AAGAAAGAGG GCAGCTAACT 000240 000241 CTGTCCTGAA GAGTGGGACA AATGCAGCCG GGCGGCAGAT CTAGCGGGAG CTCAAAGGGA TGTGGGCGAA ATCTTGAGTC 000320 000321 TTCTGAGAAA ACTGTACAAG ACACTACGGG AACAGTTTGC CTCCCTCCCA GCCTCAACCA CAATTCTTCC ATGCTGGGGC 000400 000401 TGATGTGGGC TAGTAAGACT CCAGTTCTTA GAGGCGCTGT AGTATTTTTT TTTTTTTGTC TCATCCTTTG GATACTTCTT 000480 000481 TTAAGTGGGA GTCTCAGGCA ACTCAAGTTT AGACCCTTAC tctttttgtt tgttttttga aacaggatct tgctctgtca 000560 000561 cccaggcttg agtgcagtgg tgcgatcaca gcccagtgca gcctcgacca cctgtgctca agcaatcctc ccatctccat 000640 000641 ctcccaaagt gctgggatga caggcgtgag ccacagctcc cagcCTAGGC CCTTAATCTT GCTGTTATTT TCCATGGACT 000720 000721 AAAGGTCTGG TCATCTGAGC TCACGCTGGC TCACACAGCT CTAGGGGCCT GCTCCTCTAA CTCACAGTGG GTTTTGTGAG 000800 000801 GCTCTGTGGC CCAGAGCAGA CCTGCATATC TG |
Predicted Small Protein
Name | NONHSAT027012_smProtein_113:220 |
Length | 36 |
Molecular weight | 3858.5637 |
Aromaticity | 0.0285714285714 |
Instability index | 82.2542857143 |
Isoelectric point | 11.7350463867 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.048436671966 |
Amino acid sequence | MPPIPHIFSCRTSLPKRNSPSHGPTLGRALTKTMK |
Secondary structure | LLLLLLEEELLLLLLLLLLLLLLLLHHHHHHHLLL |
PRMN | - |
PiMo | - |