NONHSAT027012

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT027012

Source

NONCODE4.0

Same with

,

Classification

sense

Length

832 nt

Genomic location

chr12+:13044513..13066067

Exon number

3

Exons

13044513..13044598,13065018..13065076,13065381..13066067

Genome context

Sequence
000001 TCTCCCCCAG CACTGAGGAG CTCGCCTGCT GCCCTCTTGC GCGCGGGAAG CAGCACCAAG TTCACGGCCA ACGCCTTGGC 000080
000081 ACTAGGGTTT TGAAGAGACA GGGGACACGC TCTATGCCCC CTATTCCACA CATTTTCAGC TGCAGAACCA GCCTCCCCAA 000160
000161 AAGGAATTCT CCATCCCACG GGCCCACGCT TGGCCGAGCC CTTACAAAGA CTATGAAGTA AAGAAAGAGG GCAGCTAACT 000240
000241 CTGTCCTGAA GAGTGGGACA AATGCAGCCG GGCGGCAGAT CTAGCGGGAG CTCAAAGGGA TGTGGGCGAA ATCTTGAGTC 000320
000321 TTCTGAGAAA ACTGTACAAG ACACTACGGG AACAGTTTGC CTCCCTCCCA GCCTCAACCA CAATTCTTCC ATGCTGGGGC 000400
000401 TGATGTGGGC TAGTAAGACT CCAGTTCTTA GAGGCGCTGT AGTATTTTTT TTTTTTTGTC TCATCCTTTG GATACTTCTT 000480
000481 TTAAGTGGGA GTCTCAGGCA ACTCAAGTTT AGACCCTTAC tctttttgtt tgttttttga aacaggatct tgctctgtca 000560
000561 cccaggcttg agtgcagtgg tgcgatcaca gcccagtgca gcctcgacca cctgtgctca agcaatcctc ccatctccat 000640
000641 ctcccaaagt gctgggatga caggcgtgag ccacagctcc cagcCTAGGC CCTTAATCTT GCTGTTATTT TCCATGGACT 000720
000721 AAAGGTCTGG TCATCTGAGC TCACGCTGGC TCACACAGCT CTAGGGGCCT GCTCCTCTAA CTCACAGTGG GTTTTGTGAG 000800
000801 GCTCTGTGGC CCAGAGCAGA CCTGCATATC TG
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Predicted Small Protein

Name NONHSAT027012_smProtein_113:220
Length 36
Molecular weight 3858.5637
Aromaticity 0.0285714285714
Instability index 82.2542857143
Isoelectric point 11.7350463867
Runs 5
Runs residual 0.0382566585956
Runs probability 0.048436671966
Amino acid sequence MPPIPHIFSCRTSLPKRNSPSHGPTLGRALTKTMK
Secondary structure LLLLLLEEELLLLLLLLLLLLLLLLHHHHHHHLLL
PRMN -
PiMo -