NONHSAT027601

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT027601

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2092 nt

Genomic location

chr12+:32155165..32157256

Exon number

1

Exons

32155165..32157256

Genome context

Sequence
000001 atggcgtgaa cctgggaggc ggaggtggca gtgagccgag atcgtgccac tgcactccag cgtgggcgac acagcaagac 000080
000081 tccatctcaa aaaaaaaaaa aaaaaaaaaa tcaagtagct tgctcggggt tccataacac ctcttccttc tgtttctctg 000160
000161 gctttccctc agtccacata taaggcttca tgagagaaga cacgaatgga tataaaccaa tgggaataaa ccaagacaag 000240
000241 tcctggttta tgaattggtc tgcacagtat gctggctcca gctggaagta ttacatagcc tcacttagag atgaccctaa 000320
000321 gagacagtga taaagCCAAC CTCATATCTT GCTACCAGAA GCACATGAGA ATAATTCTTT TAAGAGGCTT TAAaatccca 000400
000401 gctactcagg agggtgaagt gggaggatcc cttgagcatc ggagcttgag accagcctgg acaacatagt aggacactgc 000480
000481 ctcaataaaa aaTTAAGTAA ATAAATAGAT AGCTTTTGAG TTATCTATAC TGTGATATAA TACACCACAC CCTTTACAAG 000560
000561 AGCAAATTCT GGGGCATGAT TAAATGAAAA GCAAAGGTAG TACTTCATAG CATCTGCAAA CTGGCATAGT GCAGACAGGC 000640
000641 AAAAAGCAAT GGTAAATAAC TACTGGAACA TATGTAGAAA ATGTCCTGTT TGGCATCTAC Tgcagagtag gctctcaatc 000720
000721 agatgggtaa gatagctagt cctatggatg tcagcctttt tccccagcca ccctggtgct taataggccc atttataaag 000800
000801 tgccatggca acaagaaagg aggtctgcat ggacttctca ctgaggcttc tctgcccatg caccaagagt caaggctatg 000880
000881 ctgggcccct gactgatcac accattctcc agggaaccaa tgagcctctt ggtggtagat tgatacattg gaccctttct 000960
000961 acacagaagg agaagcaatt tgtgcctttg ggaatagaaa cattccaaat atgaatttgc ctgccAGAAA TGGTCCTGCT 001040
001041 GGCACTAAGc agaaggccta ttcattgctg tgatattcca tacaaatcac taagcaacct gtctacagtg aaggacacga 001120
001121 tgagagagaa ttacactgat acaatttact agcactacca caagccccaa ggacccagaa gcatctgact tgacaaaatg 001200
001201 gcagaatgcc tgctaacagc ttagttacta cattagctgg agaaaattag ctggaggatt agaaggctgt cttacagaat 001280
001281 gaatatatga cttaagccag tagctaatat ttggtgacgt ctcccgcata gccaaatacc gcatgaaccg aataaccaag 001360
001361 gggtggaggt ttggaatggc ccctttcact ttttcccttt ttattttaat ttatttattt gaggagttgc tgtgttaccc 001440
001441 aggctggagt gcagtggtgt gagcacagct cactgcaacc tcaacctccc aggctcaagt aatcctccca cctcagcctc 001520
001521 ccaagtagct gggactacaa acatgcgcca ccacccccag cttatttttg tggttttagt agagaagggg tctcactatg 001600
001601 ttgcccaggc tggtctccta ctcctgggtt caagcaatca acctgccttg gcctcccaaa gtgcttggat tacaggtgtg 001680
001681 tgccactgca cccagccAAC ATTTTCCCTT TTTAAAGAAA Agaaacataa ttcagacata catataaagc atacaattca 001760
001761 gtgatatttt ttagtatatt tataaagttg tacaaccatc aacactatct aatttcagca gattttcatc atctccaaaa 001840
001841 gaaactccat atccattagc agttcacttt ccattcacac caccctaccc ctagcacctg acaaccacta agctactttc 001920
001921 tgtctctatc aatttacata ttctgtgcat tttatattaa taaaatcatg taatatgtga ccttttgcat ctggctcttt 002000
002001 tcatttagca taatgttttc aaggcttatc tgtgttgtag tatgtatcaa tatttcattc cttttggcca ggcatggcag 002080
002081 ctaacgcctg ta
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Predicted Small Protein

Name NONHSAT027601_smProtein_722:895
Length 58
Molecular weight 6242.324
Aromaticity 0.0701754385965
Instability index 66.1263157895
Isoelectric point 7.77569580078
Runs 9
Runs residual 0.00394736842105
Runs probability 0.0337788769162
Amino acid sequence MGKIASPMDVSLFPQPPWCLIGPFIKCHGNKKGGLHGLLTEASLPMHQESRLCWAPD
Secondary structure LLLLLLLLLLLLLLLLLLEEELLLEELLLLLLLLLLHHHHHLLLLLLLLLLLEELLL
PRMN -
PiMo -