NONHSAT028050

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT028050

Source

NONCODE4.0

Same with

,

Classification

sense

Length

563 nt

Genomic location

chr12-:49332204..49351228

Exon number

2

Exons

49332204..49332630,49351093..49351228

Genome context

Sequence
000001 GGGAAGGAAG GAGGGAGCCG GGGAGTGGGC CAGGGCAGCA GCCGGGCTGA AGTCGGCTTG GGGAGCCAGA GGGAGCGGAG 000080
000081 CGGAACCTGC GGGGCAGAGG CGGCGGCCGC AGCGGCGCAG CTGATAGCAG GAACAGGGCC CTGGGTATCA TGTCCACATG 000160
000161 CCCAGCAAGA GCCTTGCCTC CCCTGCCTCC CCTCCTTTTT CCTGTCCACC TATATGACCA ATCCCTAATT GCTGTCCTGA 000240
000241 TGATGAGTCA TTCCAATTTA CTGGATTTAA AACAAAAAGT TGTTACGGTT TCATGGGGTG GCCCCTCTCT CTCTCACCCT 000320
000321 CTGGGTTTCG GGAGGTCGAG TGGGGTATTC TCTTTGTTTG GCAGTGGTTG CTGTCCTCTT GGCATCTGAG TCCTTTCCCT 000400
000401 GTCCCCACAA GCCCTTCTAC TCCCTGTTTG CCTTTCCTTT GCCACCCTCT CCCTGTTTTA CATGGAAATT GCACGGGCCT 000480
000481 CTCTGTGTTT GCGTGCATGT GTGCGCCTGT ATATACATGT ATAGAGAGAT ATATTTGTGG GGGCCGGGGG GAGCGGGGAG 000560
000561 GGG
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Predicted Small Protein

Name NONHSAT028050_smProtein_149:388
Length 80
Molecular weight 8348.8266
Aromaticity 0.0759493670886
Instability index 60.1506329114
Isoelectric point 8.63507080078
Runs 9
Runs residual 0.0263568579851
Runs probability 0.0476849398418
Amino acid sequence MSTCPARALPPLPPLLFPVHLYDQSLIAVLMMSHSNLLDLKQKVVTVSWGGPSLSHPLGF
GRSSGVFSLFGSGCCPLGI
Secondary structure LLLLLLLLLLLLLLLLLLEEELLHHHHHHHHHHHHHHHHHLLLEEEEELLLLLLLLLLLL
LLLLLEEEEELLLLLLLLL
PRMN -
PiMo -