NONHSAT028136

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT028136

Source

NONCODE4.0

Same with

,

Classification

sense

Length

952 nt

Genomic location

chr12+:50152587..50155920

Exon number

2

Exons

50152587..50153104,50155487..50155920

Genome context

Sequence
000001 CACttctttc tttccttttt tttttttttt tgcacttctt tctGTACTAC TTTGGGCAGT GCTCTCTAAG CCTTCCCATT 000080
000081 ATCCTTCATA GGATGGAGCC TTCTGCCACA AGTGAAAACA GGCTGCACAA GGTTGGGCAT TGCTAAGAGA AAATGGTTTG 000160
000161 CTCAGACACC ATTTGTGTAA GGCCAGTCTG GCAGTGGCTG ATTGTTAAAA TGATTGAAAC TCTTCCAGTG ACCAGTGCAG 000240
000241 TATTGTGCCT AGGGAAGTAA AGTGGTCTTC ACCCTAGGCT GCAGTTCTCG TGAATGGTAA TGTTCATAGG GTTCACATTT 000320
000321 GATGTACTTT CAAGTGACTA TGAGCCAGAA AGTATGGCTG GTTTTTTTTT CTCTGCAACT TCTGCTGTAT AGTAACTTCA 000400
000401 TCTCTTACAT TTGTTAGGCA AACCTGTATG TGGGACTGGT GGTCATGTGT GGCTTCGTCC TTTTTGATAC TCAACTCATT 000480
000481 ATTGAAAAGG CCGAACATGG AGATCAAGAT TATATCTGGC ACTGCATTGA TCTCTTCTTA GATTTCATTA CTGTCTTCAG 000560
000561 AAAACTCATG ATGATCCTGG CCATGAATGA AAAGGTTAGT TAGCCTACAA CCCAAAGATG AGACAATAAT GGCTCCTGAG 000640
000641 CTTGGCATGT GTGTATACTT CAGATTTGAA AACTTGCTCA CACACTGTGT TAGGTCCAGG GTAACTGTAA GGCAGGCCAC 000720
000721 TGAGTAAGAG GTAAGCCAGA AGTCTTCAGT TGTTAGAAAA AAAGCAGCAA GTGAAAAAAA AATTTTTTTA ACTAATTCCT 000800
000801 GCGTTTAGTA TGAAAGGGAA AAAAGCTTCA GTGGCAGTAA ACACAACCTG CTACATGAAT AATTTAAAGG CTATATAGTT 000880
000881 GTGACTCAGA GAAAGGTATT GTGGAGGACG TTGTAAATTT CAGAAGTAGA CTAATTTTAT CCATTTGTTA AT
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Predicted Small Protein

Name NONHSAT028136_smProtein_152:259
Length 36
Molecular weight 3933.8318
Aromaticity 0.0571428571429
Instability index 48.0742857143
Isoelectric point 7.72113037109
Runs 7
Runs residual 0.0188861985472
Runs probability 0.027847174906
Amino acid sequence MVCSDTICVRPVWQWLIVKMIETLPVTSAVLCLGK
Secondary structure LLLLLLEEEELHHHHHHHHHHHHLLLLEEEEEELL
PRMN LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL
PiMo oooooooooooTTTTTTTTTTTTTTTTTTiiiiii