NONHSAT028820

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT028820

Source

NONCODE4.0

Same with

,

Classification

sense

Length

588 nt

Genomic location

chr12-:56743285..56748291

Exon number

6

Exons

56743285..56743293,56743373..56743420,56743881..56744216,56744613..56744672,56744882..56744974,56748250..56748291

Genome context

Sequence
000001 CAGAGCTCCC ATTGACCACG GGTTGGAACA GCTGGAGACA TGAGCCTTTG TGGTAGAAAC CCAGCCCTGC ATGCCCCAAA 000080
000081 CTCCCCATCG ACCCCTCATC CTCAAGACTG GCAGCAAGTT CACCGTCCGA ACAAGGCTGC TGGTGAGACT CCAGGAAGGC 000160
000161 AATGAGTCAC TGACTGTGGA AGTCTCCATT GACAGGAATC CTCCTCAATT ACAAGGGTAG GTGCTTGACA AGGACACTGC 000240
000241 AAACATCtgt acagtgtatg acctgcagaa ccacattcgg cagccctgGT GGCACAAACA AGGAAGAGGG GGATTTGGGA 000320
000321 TATGGACAAA GGGAGATGGC GAGATCTGAA ATGAAGTGGA ACTTCTGTTT TTTTTTTTCT GCTGAGTTTT TAGAATAATT 000400
000401 CCATTCCTTG TCTCCATGTA TCTTCCTCCT GGAACAGCTT CCGGAAGTTC AACATTCTGA CTTCAAACCA GAAAACTTTG 000480
000481 ACCCCCGAGA AGGGGCAGAG TCAGGGTTTG ATTTGGGACT TTGGTTACCT GACTCTGGTG GAGCAACGTT CAGGTGGTTC 000560
000561 AGGAAAGGGC AGCAATAAGG GGCCACTA
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Predicted Small Protein

Name NONHSAT028820_smProtein_257:397
Length 47
Molecular weight 5294.864
Aromaticity 0.173913043478
Instability index 43.3413043478
Isoelectric point 4.92950439453
Runs 7
Runs residual 0.00918737060041
Runs probability 0.0293360587479
Amino acid sequence MTCRTTFGSPGGTNKEEGDLGYGQREMARSEMKWNFCFFFSAEFLE
Secondary structure LEEEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHLEEEEEEEEEEL
PRMN -
PiMo -