NONHSAT029680
Revision as of 21:07, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT029680 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
958 nt |
Genomic location |
chr12+:81158016..81164063 |
Exon number |
3 |
Exons |
81158016..81158103,81160528..81160599,81163266..81164063 |
Genome context |
|
Sequence |
000001 TCTGGGAGGT CTGATGTTAG GGAAAAAGAA GGAGGAAAGC AAGATTAAAA ATCATTCCTG GAAATGCAAG AGAAAATGTG 000080
000081 CTGGAGTGGG TGCTGTTAGT ACCAGGGACA CTGGACAAGA AAGATAAGCA AGCCACTGCT GTCTGATTCC TACATAGCAG 000160 000161 AAGTGTGGAG AGAAGCTACA TATGGTGGAG ATGACCCTCT GCTCTTCTGA AGGCCTTTGG GGTCTGATAC AAACCCCTGT 000240 000241 GTCCCAATTA TAAATTCTCC TTTTCTTCTT TACCTAGGTT AAAGTGTTGG ATTCATAATT CTCACTTCAG GAAGACTGAA 000320 000321 AACCAGACTT TATTCTGCTA GATCCCAAGA TATCAAGGAA GAGGAAAAGG GAAGAGCCCC AGGCACTATT AAACCACAGC 000400 000401 TACAATCACT GCCATTTGAA ACTTCCCACC AAACAACTTT ACTATTCTGA TTTAATTTCA ACTCCCAGGG AGAGTTAGTA 000480 000481 TTAAGAGGAA GTACCTATCA TCCATGATAA TCCACCAGCT CTGGGGGTTT AGAAGGGAAA GGATGGAGGT CTCAGTGCTT 000560 000561 GAGGCTAGGC TGACAGCTGA GCAGGGCTCC AGCTCACCTT AATCTCACTC CTGTGGATGC CTGCACTAGG GGCCTGAGCA 000640 000641 TTCTCCCAGA TCTCTGCATA GGAGGCTGCC CTTAGGCATT ATTAAGGTGT GAAAGCAGCA AGAAAGAGCA GAATTAAACT 000720 000721 GCTTTTCTCT AATGTATCCT TTTACAGCCC AGTGTATTTT GCCCTAGGCT AGCCTTTTCT TCTCCTTTCA CCCTCCACAT 000800 000801 GCCAGTCCGA GACAGCCTTT CTTCTCACAG GAATTATTGT ATTATTTCTT AAATTCTTTT TTTCTTCTCC ATGGCTTTTC 000880 000881 TAGAGGAAAC CTAACAGTGT GGGTTTATCA ATCATTTTGA CAAGACTCTG AATTCCACTG AACAGATTTT TGAATAAA |
Predicted Small Protein
Name | NONHSAT029680_smProtein_503:601 |
Length | 33 |
Molecular weight | 3715.2242 |
Aromaticity | 0.0625 |
Instability index | 67.390625 |
Isoelectric point | 6.53094482422 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.0238852297676 |
Amino acid sequence | MIIHQLWGFRRERMEVSVLEARLTAEQGSSSP |
Secondary structure | LEEEELLLLHHHHEEEHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |