NONHSAT030633
Revision as of 21:11, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT030633 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
548 nt |
Genomic location |
chr12+:110370849..110421646 |
Exon number |
3 |
Exons |
110370849..110370889,110418710..110418984,110421415..110421646 |
Genome context |
|
Sequence |
000001 ACACTGGATG ACCTGCTGCG TGACCAGCTG AACGTCTGTG GAACCTTCCC AACTGGAGAT GTGAAACGGT CATTCTCCAT 000080
000081 CCACTCACCT GGTTTCCTGC CACAGAGATA GAAGGCTAGT CTGTCCGTTA GCTCATACTG TATTTCCACG AGGCGCTCTG 000160 000161 CCAGCTCATG GTGCCCTCCT TGCCTACCAA GAGAAAACAA AGTACCATTT ATATTGCTCA CTATTCACTG ACTTTAAAAT 000240 000241 GGAGTACAAA GACGTCTCCT GAGACACCTG AGCAGTTTAT CACACAAGAC TTTTGAGAAT CATCAACCTT CTTGTGGATG 000320 000321 AAAGAAGTTG GCTTGTGCTC CTAAAGATAA CAGTCTCAAA CAGGTTTCAA GATTCCCTGT TCTCACGCTC GAATGGAGTT 000400 000401 GCTGAAAAAC GCAGAAACAA AAAAGGAATC GTGGTTAGAG GTGTAAAGAA TGATGTCCTA GGGCAGCTGA TAGACCATTT 000480 000481 TAATATATGT TACATCAGTA ACGCATAATC TTTATTTGTC TCGGTAAAGT GCATGGACCA GTCTCTCC |
Predicted Small Protein
Name | NONHSAT030633_smProtein_167:295 |
Length | 43 |
Molecular weight | 4900.5615 |
Aromaticity | 0.119047619048 |
Instability index | 76.3142857143 |
Isoelectric point | 9.30279541016 |
Runs | 6 |
Runs residual | 0.0333031946956 |
Runs probability | 0.0441470882647 |
Amino acid sequence | MVPSLPTKRKQSTIYIAHYSLTLKWSTKTSPETPEQFITQDF |
Secondary structure | LLLLLLLLLLEEEEEEEEEEEEEEEELLLLLLLHHHHEELLL |
PRMN | - |
PiMo | - |