NONHSAT030701
Revision as of 21:11, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030701 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
774 nt |
Genomic location |
chr12-:111146204..111152944 |
Exon number |
2 |
Exons |
111146204..111146839,111152807..111152944 |
Genome context |
|
Sequence |
000001 TTAGCACAGT ATCAAACACC ATGTCTCCCA GAGAGGACCA TCCCACACAC CAGTTGTTCA GGGCTGGTGA ACAAGAGAAC 000080
000081 AGTAAACTGG TCGTTATATT CTTGGACAGA CTGGCTTGAC CTTTCCCTGG CAAGTTAGag ttgcccattt tcttcacatc 000160 000161 tttatccatg ggattctctg cggcctgaat tgaagttgag ctcctccaga gaagatcaga gtttgcctct gctggtagac 000240 000241 tggggcagta tcaacctaga ctttaaatcc tcacttgctc acttgacatt tttcttttct tttctttttt tttttttttt 000320 000321 ttgagatgga ctctcgctct gtcacccaag ctggagtgca gtggtgcgat ctcagctcac tgactgcaac ctccacccca 000400 000401 gattcaagca attttcctgt ctcagcctcc caagtagcag gatttacagg tgtctgccac catgcccggc taatttttgt 000480 000481 acttttagta aaggcggggt ttcaccatgt tggccaagct gttctcgagc tcctgacctc aagtaatctg cctaccttgg 000560 000561 cctcccaaag tgctgggatt acaggtgtaa gccaccatgc ccagacccac ttgacatttt tcagatcata caagtctcat 000640 000641 gaaattaggc cacaaacctg cagatcctgg ttgtgaattc tcaggagaaa attgttttGC CAAGAGTAAT GGAGATCCCA 000720 000721 TTGGTAATAA CTGTAATATT TTCATTGTGC ATGTGTTTGT TTTGATGAAT AAAC |
Predicted Small Protein
Name | NONHSAT030701_smProtein_20:118 |
Length | 33 |
Molecular weight | 3735.1907 |
Aromaticity | 0.0625 |
Instability index | 44.584375 |
Isoelectric point | 5.99615478516 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0429252782194 |
Amino acid sequence | MSPREDHPTHQLFRAGEQENSKLVVIFLDRLA |
Secondary structure | LLLLLLLLHHHHLLLLLLLLLLEEEEEELLLL |
PRMN | - |
PiMo | - |