NONHSAT030805
Revision as of 21:12, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030805 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
763 nt |
Genomic location |
chr12-:112846142..112847369 |
Exon number |
3 |
Exons |
112846142..112846142,112846224..112846460,112846845..112847369 |
Genome context |
|
Sequence |
000001 GCAAGACTTG AGTTCAGGAC TCCCAATCCT TCGCCATCCG AACCTGGAGG GCATCCAGTC GACACCTACA GGGGTCGGAC 000080
000081 ATGTCCAAGG CTAACTGAGA GGCCTTCCAG ACGCTTCATT TTTGTTGTTT GGGTTTGCGG CAGGGCACAA AGAGGGTGAG 000160 000161 GTAGAATGCC GTAGTGGCTC CCTCCGGTTC TTCGCCACTC TCTTGGGCTG GGGGAACGAG GCCCTTTCGG GGACCCGTAG 000240 000241 CAGACTGGTG GGTGTTAGAG GAAGCGGGGA GACGGCGCGT GCACTGTGTT CCTGGTCCTG GGTTCCAGAG GATGACACTG 000320 000321 AGCCTGTCGC AGCCACGTTG GGGTTCCGCA CTGAAGCCAA AAGGTTTCGC GTCTCCCAGC GTCCCCGACC GGAAGTCGCC 000400 000401 TCTTGGTCTT TGCGATCTTT TTCTCTGGCT CAATTTGGGC TGATTCCGTT TGTGTCCGCA ATTCCTAAAT CGAGTTTCTT 000480 000481 GAAAAGAGAC ACTGGTCTTA AGGGTTAAGA CGAAAGGTAC TGAAAATGGC GGGTGAAAAA GTTGAGAAGC CAGATACTAA 000560 000561 AGAGAAGAAA CCCGAAGCCA AGAAGGTTGA TGCTGGTGGC AAGGTGAAAA AGGGTAACCT CAAAGCTAAA AAGCCCAAGA 000640 000641 AGGGGAAGCC CCATTGCAGC CGCAACCCTG TCCTTGTCAG AGGAATTGGC AGGTATTCCC GATCTGCCAT GTATTCCAGA 000720 000721 AAGGCCATGT ACAAGAGGAA GTACTCAGCC GCTAAATCCA AGG |
Predicted Small Protein
Name | NONHSAT030805_smProtein_311:442 |
Length | 44 |
Molecular weight | 4685.4706 |
Aromaticity | 0.093023255814 |
Instability index | 60.2534883721 |
Isoelectric point | 9.78204345703 |
Runs | 5 |
Runs residual | 0.0410243010191 |
Runs probability | 0.01294824236 |
Amino acid sequence | MTLSLSQPRWGSALKPKGFASPSVPDRKSPLGLCDLFLWLNLG |
Secondary structure | LEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLL |
PRMN | - |
PiMo | - |