NONHSAT030852
Revision as of 21:12, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030852 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
539 nt |
Genomic location |
chr12-:114173984..114211466 |
Exon number |
5 |
Exons |
114173984..114174027,114184320..114184402,114188301..114188531,114204880..114205013,114211420..114211466 |
Genome context |
|
Sequence |
000001 AAAGAGGAGT CTCTCGAAAT TCAGCAACTG CTAACAGCGA GGAGGGGTTT TGAAAGGTAA AGGCCATTAG CTTGGAGGCA 000080
000081 GAAGACAGAC CTCCCTGACT GCTGAATTCC TGCCGGCCTG AAATTGGAGC ATTCCAAGCT CCTCAGATGA GTCATAAGCC 000160 000161 ACCAAGATTG TGAGCCTCTG GATACAGAAA AGGAGAAGAA GACCACATGC ATACCCACAA GAAGATGGAG GCAGAGACTG 000240 000241 GAGTGAAGAA GCCACAAGCC AAGGAATGGC TGGAGCCACC AGGAGCTGAA AGAGGCAACG AAGGATCCTC CCCTGGAGAC 000320 000321 TTCAGAGGGA GCATGGCCCT GCTGACACCT TGATTTTGGA TTTCTGGCCC CCAGAACCAT GAGAGAATAA ATTTCTGTTG 000400 000401 TGTTAAGCCA CAAGGTGCTA GCCAGGATCA CTCCCTCCGA AGTCACACCA GAGGGAGGGC TGGAGGGAGA ATCAAATGAA 000480 000481 AGAGAGAGGG AGAGAGTCTA AAGTCCACCA GGTCAGGGAG CAGGCCTGTC TCGTCTTCT |
Predicted Small Protein
Name | NONHSAT030852_smProtein_206:352 |
Length | 49 |
Molecular weight | 5219.8445 |
Aromaticity | 0.0416666666667 |
Instability index | 46.5083333333 |
Isoelectric point | 6.71661376953 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.0377394200923 |
Amino acid sequence | MHTHKKMEAETGVKKPQAKEWLEPPGAERGNEGSSPGDFRGSMALLTP |
Secondary structure | LLLLLLLEEELLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLEEEELL |
PRMN | - |
PiMo | - |