NONHSAT030852

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT030852

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

539 nt

Genomic location

chr12-:114173984..114211466

Exon number

5

Exons

114173984..114174027,114184320..114184402,114188301..114188531,114204880..114205013,114211420..114211466

Genome context

Sequence
000001 AAAGAGGAGT CTCTCGAAAT TCAGCAACTG CTAACAGCGA GGAGGGGTTT TGAAAGGTAA AGGCCATTAG CTTGGAGGCA 000080
000081 GAAGACAGAC CTCCCTGACT GCTGAATTCC TGCCGGCCTG AAATTGGAGC ATTCCAAGCT CCTCAGATGA GTCATAAGCC 000160
000161 ACCAAGATTG TGAGCCTCTG GATACAGAAA AGGAGAAGAA GACCACATGC ATACCCACAA GAAGATGGAG GCAGAGACTG 000240
000241 GAGTGAAGAA GCCACAAGCC AAGGAATGGC TGGAGCCACC AGGAGCTGAA AGAGGCAACG AAGGATCCTC CCCTGGAGAC 000320
000321 TTCAGAGGGA GCATGGCCCT GCTGACACCT TGATTTTGGA TTTCTGGCCC CCAGAACCAT GAGAGAATAA ATTTCTGTTG 000400
000401 TGTTAAGCCA CAAGGTGCTA GCCAGGATCA CTCCCTCCGA AGTCACACCA GAGGGAGGGC TGGAGGGAGA ATCAAATGAA 000480
000481 AGAGAGAGGG AGAGAGTCTA AAGTCCACCA GGTCAGGGAG CAGGCCTGTC TCGTCTTCT
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Predicted Small Protein

Name NONHSAT030852_smProtein_206:352
Length 49
Molecular weight 5219.8445
Aromaticity 0.0416666666667
Instability index 46.5083333333
Isoelectric point 6.71661376953
Runs 7
Runs residual 0.0197368421053
Runs probability 0.0377394200923
Amino acid sequence MHTHKKMEAETGVKKPQAKEWLEPPGAERGNEGSSPGDFRGSMALLTP
Secondary structure LLLLLLLEEELLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLEEEELL
PRMN -
PiMo -