NONHSAT031188
Revision as of 21:13, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT031188 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1286 nt |
Genomic location |
chr12-:121067468..121078306 |
Exon number |
2 |
Exons |
121067468..121068299,121077853..121078306 |
Genome context |
|
Sequence |
000001 CGGCGAAGGG GACGCTGCAA CGCGGAGCGG GAGCACGAGG AGGGAAGGGG CTTGGCAATG GGCCCCAAAG AGGCCGAGAC 000080
000081 CCCGGGAGTG CCGGCAGCGC TCTTTATCAC GCCTGGAGGC TCCTGCAGAG CCCCGGAACC GCCCGAACCT CCAGAAATGC 000160 000161 AGGCAGGGTG CACTCCCCAG GGGGTACAAC TTTGGCAATG AGGACTACAG AGGTCCGGGG AGAACCGGAG ACCCGAGGAG 000240 000241 CATGAAGGCA CTCTGTGACA TCACTGCCTA CAAACGCAGG GGCCGGAATG CAGTGACAGG ACACTGCTGG GAGGAAAGTC 000320 000321 TCCCAGCGCC TCCGTGTGGG GCTGCCTCCA CTCCCAATAC CGTGCGGGGG GACTAGGACG ACCCTGGTAA GTCAGCCACA 000400 000401 GGATATCAGT TCTCAGAATA GAAGAGAAGC CAGGTCTGGC AGCACCTGAT GATGCATTTC CAATTAATCT TGGAATGAGA 000480 000481 GCCGAGGGCA AGAAGCCAGC GGTGCCTGAG GGATGCTAAA GAGCCAACCG ATCCAGGGAA ACAAATGCCA GCGAGGGACC 000560 000561 CCACAGCAAA GAGACAGACA CTGTGAGCAA CTCTCCTGTT ACCATGAGGC TTGCGAGGCG TGTGTGCGGG TCTCCGCATT 000640 000641 GGCACCATCT GCCAATTCCT CAGGAGGACA GAACAAACCA GTGAGGCATG AAGATTAGAT TATGTAACGC TCGAGGATTG 000720 000721 CTGTTTTCAA AGAGGAAACA AATGGAATGA ATTGATTTGC TTGTCAAAGT CATGTCACTA AAGGAGATCT ATTCCCTCCC 000800 000801 CTTCTAAGAG GACCTCATTA AAGAGTGGAA TGATTTCACA GATTCAGAAA ATGTGAGACC ACAATCCACT CCATTCATAA 000880 000881 GAGCAAGTCC ACTTTCCAGA GTCACACTCA CACATTCTAT TCTGGTCCCC GGGCCTGAAA AAATGTCCAT CCAGCTACAA 000960 000961 CCTAAAGGGT ACTGACCTGG TGAGGAACAT AATTGTCAGC TGCTAGCCAT AAGATTCAGA GCCGGAggcc aggcgtcatg 001040 001041 gcttatgctg gtaatcccag cactttggga ggccgaggtg ggtggatcat gtgaggtcgg aagttcaaga cagcctggcc 001120 001121 aacacggtga aacctcgtct ctactaaaaa tacaaaaatt acctgggcgt ggtggcacac acctgtaacc ccagctactt 001200 001201 gggaggccaa cgcctgagaa tcacttgagc ccaagaggca gaggttgcag tgagccaaga tcacaccacc gcactccagc 001280 001281 ctgggg |
Predicted Small Protein
Name | NONHSAT031188_smProtein_512:697 |
Length | 62 |
Molecular weight | 6736.4519 |
Aromaticity | 0.016393442623 |
Instability index | 68.7737704918 |
Isoelectric point | 8.37542724609 |
Runs | 7 |
Runs residual | 0.0380629357452 |
Runs probability | 0.0427864839629 |
Amino acid sequence | MLKSQPIQGNKCQRGTPQQRDRHCEQLSCYHEACEACVRVSALAPSANSSGGQNKPVRHE D |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHHHHHLHHHHHHHHLEEEEEELLLLLLLLLLLLLLLLL L |
PRMN | - |
PiMo | - |