NONHSAT031188

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT031188

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1286 nt

Genomic location

chr12-:121067468..121078306

Exon number

2

Exons

121067468..121068299,121077853..121078306

Genome context

Sequence
000001 CGGCGAAGGG GACGCTGCAA CGCGGAGCGG GAGCACGAGG AGGGAAGGGG CTTGGCAATG GGCCCCAAAG AGGCCGAGAC 000080
000081 CCCGGGAGTG CCGGCAGCGC TCTTTATCAC GCCTGGAGGC TCCTGCAGAG CCCCGGAACC GCCCGAACCT CCAGAAATGC 000160
000161 AGGCAGGGTG CACTCCCCAG GGGGTACAAC TTTGGCAATG AGGACTACAG AGGTCCGGGG AGAACCGGAG ACCCGAGGAG 000240
000241 CATGAAGGCA CTCTGTGACA TCACTGCCTA CAAACGCAGG GGCCGGAATG CAGTGACAGG ACACTGCTGG GAGGAAAGTC 000320
000321 TCCCAGCGCC TCCGTGTGGG GCTGCCTCCA CTCCCAATAC CGTGCGGGGG GACTAGGACG ACCCTGGTAA GTCAGCCACA 000400
000401 GGATATCAGT TCTCAGAATA GAAGAGAAGC CAGGTCTGGC AGCACCTGAT GATGCATTTC CAATTAATCT TGGAATGAGA 000480
000481 GCCGAGGGCA AGAAGCCAGC GGTGCCTGAG GGATGCTAAA GAGCCAACCG ATCCAGGGAA ACAAATGCCA GCGAGGGACC 000560
000561 CCACAGCAAA GAGACAGACA CTGTGAGCAA CTCTCCTGTT ACCATGAGGC TTGCGAGGCG TGTGTGCGGG TCTCCGCATT 000640
000641 GGCACCATCT GCCAATTCCT CAGGAGGACA GAACAAACCA GTGAGGCATG AAGATTAGAT TATGTAACGC TCGAGGATTG 000720
000721 CTGTTTTCAA AGAGGAAACA AATGGAATGA ATTGATTTGC TTGTCAAAGT CATGTCACTA AAGGAGATCT ATTCCCTCCC 000800
000801 CTTCTAAGAG GACCTCATTA AAGAGTGGAA TGATTTCACA GATTCAGAAA ATGTGAGACC ACAATCCACT CCATTCATAA 000880
000881 GAGCAAGTCC ACTTTCCAGA GTCACACTCA CACATTCTAT TCTGGTCCCC GGGCCTGAAA AAATGTCCAT CCAGCTACAA 000960
000961 CCTAAAGGGT ACTGACCTGG TGAGGAACAT AATTGTCAGC TGCTAGCCAT AAGATTCAGA GCCGGAggcc aggcgtcatg 001040
001041 gcttatgctg gtaatcccag cactttggga ggccgaggtg ggtggatcat gtgaggtcgg aagttcaaga cagcctggcc 001120
001121 aacacggtga aacctcgtct ctactaaaaa tacaaaaatt acctgggcgt ggtggcacac acctgtaacc ccagctactt 001200
001201 gggaggccaa cgcctgagaa tcacttgagc ccaagaggca gaggttgcag tgagccaaga tcacaccacc gcactccagc 001280
001281 ctgggg
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Predicted Small Protein

Name NONHSAT031188_smProtein_512:697
Length 62
Molecular weight 6736.4519
Aromaticity 0.016393442623
Instability index 68.7737704918
Isoelectric point 8.37542724609
Runs 7
Runs residual 0.0380629357452
Runs probability 0.0427864839629
Amino acid sequence MLKSQPIQGNKCQRGTPQQRDRHCEQLSCYHEACEACVRVSALAPSANSSGGQNKPVRHE
D
Secondary structure LLLLLLLLLLLLLLLLLLLLHHHHHHHLHHHHHHHHLEEEEEELLLLLLLLLLLLLLLLL
L
PRMN -
PiMo -