NONHSAT032158
Revision as of 21:17, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT032158 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
733 nt |
Genomic location |
chr12+:133562951..133582762 |
Exon number |
3 |
Exons |
133562951..133563459,133564251..133564354,133582643..133582762 |
Genome context |
|
Sequence |
000001 GCACTCCCGG CCTTAGTCGG GTGCGCGCGT GCAGGGCTGT TTCCGGCTTA GACTCAGTGG ACCGGAATCT GGCCAGCGGG 000080
000081 TGTACCTGGC TGAGTCTCTG TGGCCGCGGA GGCGCGGAGC TAAGCGGCTC GGATTATCCT GGGCAGACCA GAGACTTGAC 000160 000161 CAGCTAAACA CTTCCGTCGG TCCGGGGCGT GGACGGGGCC AGATCAGCCT CCTGCTCTCC CGAGTCAGGG CCACGGAAAG 000240 000241 GCACAAATCC ATCCGTGCGA CTCCTGGTAC CCAGACCGGG AGGTTGTCTA GTCACGCGCG GTCTGTGTTG GGCGAGAGCT 000320 000321 GAGGAGCCGG CGTCCCTGCC AACGACTCGG CCCCGGGACG GTCAGGAGCC TGGGGCCCTG GTCCCGCACC TGTCTTCGGG 000400 000401 CGGACGCATC CCTCACGGTC TCTCCGCAGC CCGCGGGTCC TGCCCCCGCA GGCAGCGCGC GAACGTGGGC GTGGGGATGG 000480 000481 CCACCAGTTT CCGGACAGCT TCGTGCTGGC CTGTAACTCA CATGGGAGGT CTAAACTGGA AATACATAAA GACACCTTAT 000560 000561 TGTATTCGTG GAAGCTCAGA GTGTGACCAA CTGGAACCCT CAAGAGGACC GAGATTTGCC AGTTTTTCAG TTGGGCATAT 000640 000641 ACAGAAACTC CATTTCTGAA TTTCCCTGCT GTTCCCTCCC AGCCCCCAct ctttgctgtt gcttagaatg cagatgtgat 000720 000721 gactagagcc atc |
Predicted Small Protein
Name | NONHSAT032158_smProtein_476:658 |
Length | 61 |
Molecular weight | 6819.7667 |
Aromaticity | 0.133333333333 |
Instability index | 47.24 |
Isoelectric point | 9.35260009766 |
Runs | 11 |
Runs residual | 0.0335992907801 |
Runs probability | 0.0356345650464 |
Amino acid sequence | MATSFRTASCWPVTHMGGLNWKYIKTPYCIRGSSECDQLEPSRGPRFASFSVGHIQKLHF |
Secondary structure | LLLLLEELLLLLLLLLLLLLEEEELLLEEEELLLLLLLLLLLLLLLEEEEELLHHHLLLL |
PRMN | - |
PiMo | - |