NONHSAT032158

From LncRNAWiki
Revision as of 21:17, 16 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT032158

Source

NONCODE4.0

Same with

,

Classification

sense

Length

733 nt

Genomic location

chr12+:133562951..133582762

Exon number

3

Exons

133562951..133563459,133564251..133564354,133582643..133582762

Genome context

Sequence
000001 GCACTCCCGG CCTTAGTCGG GTGCGCGCGT GCAGGGCTGT TTCCGGCTTA GACTCAGTGG ACCGGAATCT GGCCAGCGGG 000080
000081 TGTACCTGGC TGAGTCTCTG TGGCCGCGGA GGCGCGGAGC TAAGCGGCTC GGATTATCCT GGGCAGACCA GAGACTTGAC 000160
000161 CAGCTAAACA CTTCCGTCGG TCCGGGGCGT GGACGGGGCC AGATCAGCCT CCTGCTCTCC CGAGTCAGGG CCACGGAAAG 000240
000241 GCACAAATCC ATCCGTGCGA CTCCTGGTAC CCAGACCGGG AGGTTGTCTA GTCACGCGCG GTCTGTGTTG GGCGAGAGCT 000320
000321 GAGGAGCCGG CGTCCCTGCC AACGACTCGG CCCCGGGACG GTCAGGAGCC TGGGGCCCTG GTCCCGCACC TGTCTTCGGG 000400
000401 CGGACGCATC CCTCACGGTC TCTCCGCAGC CCGCGGGTCC TGCCCCCGCA GGCAGCGCGC GAACGTGGGC GTGGGGATGG 000480
000481 CCACCAGTTT CCGGACAGCT TCGTGCTGGC CTGTAACTCA CATGGGAGGT CTAAACTGGA AATACATAAA GACACCTTAT 000560
000561 TGTATTCGTG GAAGCTCAGA GTGTGACCAA CTGGAACCCT CAAGAGGACC GAGATTTGCC AGTTTTTCAG TTGGGCATAT 000640
000641 ACAGAAACTC CATTTCTGAA TTTCCCTGCT GTTCCCTCCC AGCCCCCAct ctttgctgtt gcttagaatg cagatgtgat 000720
000721 gactagagcc atc
[back to top]

Predicted Small Protein

Name NONHSAT032158_smProtein_476:658
Length 61
Molecular weight 6819.7667
Aromaticity 0.133333333333
Instability index 47.24
Isoelectric point 9.35260009766
Runs 11
Runs residual 0.0335992907801
Runs probability 0.0356345650464
Amino acid sequence MATSFRTASCWPVTHMGGLNWKYIKTPYCIRGSSECDQLEPSRGPRFASFSVGHIQKLHF
Secondary structure LLLLLEELLLLLLLLLLLLLEEEELLLEEEELLLLLLLLLLLLLLLEEEEELLHHHLLLL
PRMN -
PiMo -