NONHSAT032247

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT032247

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1040 nt

Genomic location

chr13-:19622134..19636808

Exon number

6

Exons

19622134..19622426,19624099..19624260,19625301..19625540,19627405..19627538,19630573..19630708,19636734..19636808

Genome context

Sequence
000001 TGGAAGAGGA GGAGGCCCCC GACATCGGCA TATACCACTG CCCAAACTAT GAGAAAACCC ATGTGAAGTC CACCTTGTTA 000080
000081 AAGACATAGT GGCCCATGTG CCGGACAGTC AGCTCACGCT GGGCCACATG GAGGAGCACA GCTTCACCGA GCCCATCCTC 000160
000161 ATCCCTAAGA AAGACGGGCT GGGCTTGGCT GTCCCGGCCC CCACGTTCCA Tgcaggccag gcgtcctgtg ttttcatttg 000240
000241 ctaatctggc caccctCGCT AAGGCCTGTC ACCTGGCCAC CTCGCAGCAT CACCAGGTCA GAGGAAGAGT GGTCGGGGCA 000320
000321 CTTCACTGAG CCAAGAGAAA AGCAGGGGAC ATCAAAAAGG GAGTCCCAGG TTCCCTCACC ACCTTCCTGT CCCACCCCAA 000400
000401 GAATGTCCAG CTTCGTGGAG CCACCTGACA CCATGAAGAA ACTGTTCCGG GTAGAAAACT GGCCAGATGA TGCATTGCTG 000480
000481 GCCAAGCCCA AAGTGACCAA GTCCTGCCTG ATCTGTGTGA AGGACAGCTA CACCGACTTC CACATCGACT GTGGGGGCGC 000560
000561 CTCCGCCTGG TACCACGTGC TCAAGGGGGA GAAGACCTTC TATCTCATCA GGCTGGCCTC GGTCGACATC TCCTGTATGA 000640
000641 GTGCTGATAG TCTGCCGCTA ACCACAGCGA GATGTTCTTT GCTGACCAGG TTCACAAATG CTACAATTGC ATCGTCAAGC 000720
000721 AGGGCCAGAC CCTCTTCATC CCCTCAGGCA CTGACAGAGC TCTCGTGGGC CCCGAGCCCT GCAGCCTCCC AGGGCGGTTG 000800
000801 TCCCCTGGTC CACTTCAGCT ATGCAGGGCC CAGTGGGGAA GCCTGAGCTG GTGTGTCTGG GGCTTGGACC CACCCCCATC 000880
000881 GTCGCCTGCT TGATGGTCAG TGCACTGAGA ATGGCTCTTT GGTGGCTTCC AGAGCATATG AAGTTGAAAA GAGGTTGAAA 000960
000961 CTAGGCAGCC TGACTCAGTT TCCCAACTTC AAAACTGCCT GCTGGTACAT GGGGAAGCAC CTGCTGGAGG CGTTCAAAGG 001040
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Predicted Small Protein

Name NONHSAT032247_smProtein_95:328
Length 78
Molecular weight 8584.7898
Aromaticity 0.0779220779221
Instability index 80.0324675325
Isoelectric point 12.369934082
Runs 11
Runs residual 0.00677583286279
Runs probability 0.0366141542613
Amino acid sequence MCRTVSSRWATWRSTASPSPSSSLRKTGWAWLSRPPRSMQARRPVFSFANLATLAKACHL
ATSQHHQVRGRVVGALH
Secondary structure LLEEELLLLLEELLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLHHHHHHHHHHHHH
HHLLLLLEEEEEELLLL
PRMN -
PiMo -