NONHSAT032562

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT032562

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

770 nt

Genomic location

chr13-:25514740..25542625

Exon number

5

Exons

25514740..25514923,25516125..25516246,25517070..25517159,25525535..25525626,25542344..25542625

Genome context

Sequence
000001 gctctctgct gccccaggaa tgggctgatt tcctgagtac acattaatct gagctccctc agccctaggg gtagggggat 000080
000081 tgggggcaca agatgggtgg agccagatag ggaagattcc cccagtgttg tcctgctccc agtccaggtt tgggacaatg 000160
000161 ccggcagcgt ttccctgtgt ctttccccca caaagtctcc aagtctttcc tcaaatgatc gtcaaggttt gggagaaaca 000240
000241 atctcttcct ctgcccgggt tgcgtggatc tccagtggaa agGCTTTATC TACCAAGAAA TGAATTGGAT AATCCACATA 000320
000321 AACAAAAAGC TTGGAAAATT TATCCACCAG AATTTGCCGT GGAGATACTT TTTGGTATGG TTTCTGTGGA TTCTCTGCTC 000400
000401 TTTGTGCTCT CCTCCCCACA TTGGTGGCTC CATCTGGCAC AGGGAAGCTT CTGGATGTCA GAAGgtggat tctcactctg 000480
000481 tcacccaggc tggagtgtag tggcacaatc tttgctcact tcaacctctg ccttctgcgt tcgagcaatt ctcctgcctc 000560
000561 agcctcccga gtaactggga ttacagGGAC AGTAAGTGGT GTTTCCTGGG AGATGCTACG GTGTTATTTT TGCACTACAA 000640
000641 GGGCTCTGAA GACTGCCAGG CTTGAAGTGA AGAACCACGT CACCTGCCTA TCCCAGCCAG GTGACAGTGG ACAAGGGGCT 000720
000721 TCACCTCTGA GCTGTTTTCC AGCTGTACTG GGCACATTCC TCCTCTCACC
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Predicted Small Protein

Name NONHSAT032562_smProtein_299:499
Length 67
Molecular weight 7685.9364
Aromaticity 0.136363636364
Instability index 45.0090909091
Isoelectric point 9.35430908203
Runs 12
Runs residual 0.0312103066594
Runs probability 0.0537670022965
Amino acid sequence MNWIIHINKKLGKFIHQNLPWRYFLVWFLWILCSLCSPPHIGGSIWHREASGCQKVDSHS
VTQAGV
Secondary structure LLEEEEHHHHHLHHHHHLLLHHHHHHHHHHHHHHHLLLLLLLLLEEEELLLLLEEELLLL
LLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL
LLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooooooooooooooooo
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