NONHSAT032707
Revision as of 21:19, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT032707 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
913 nt |
Genomic location |
chr13+:29344750..29360542 |
Exon number |
2 |
Exons |
29344750..29345285,29360166..29360542 |
Genome context |
|
Sequence |
000001 TGTGTGATGT TCCCCTCCCT GTGTCCGTGT GTTCTCACTG TTCAACTCCC ACTTATGAGT GAGAGCATGC AGTGTTTGGT 000080
000081 TTTCTGTTCC TGTGTTAGTT TGCTGAGGAT GATGGTTTCC AGCTTCATCT ATGTCCCTGC AAAGGACACG AACTCATCCT 000160 000161 TTTTTATGAC TGCATAGTAT TTCATGGTGT ATATGTGCCA CATTTTCTTT ATCCCGTCTA TCATTGATGG GCATTTGTGT 000240 000241 CGGTTCCAAG TCTTTGCTAT TGTAAATAGT GCTGCAATAA ACATACATGT GCATATGTCT ATAGTAGAAT GATTTATAAT 000320 000321 CCTTTGGGTA TATACCCAGT AATGGGATTG CTGGGTCAAA TGGTATTTCT GGTTCTAGAT CCTTGAGGAA TCGCCACACT 000400 000401 GTCTTCCACA ATGGTTGAAC TGATTTACGC TCCCACCAAC AGTGTAAAAG CATTCCTATT TCTCCACATC CTCTCCAGCA 000480 000481 TCTGTTGTTT CCTGACTTTT TAATGATCAC CATTCTAACT GGCATGAGAT GGTATCTATT CTGTTGATTT GGGGTGGAGA 000560 000561 GTTCTGTAGA TGTCTGTTAG GTCCACTTGG TCCAGAGCTG AGTTCAAGTT CTGAATATCC CTGTTAATTT TCTGTCTCAT 000640 000641 TGATCTGTCT TGTTGACAGT GGGGTGTTAA AGTTTCCCAC TATTACTGTG TGGAAGTCTA AATCTCTTTG TAGGTCTCTA 000720 000721 AGAACTTGTT TTATGAATCT GGGTCCTGCT GTATTGGGTG CATATATATT TAGGACAGTT AGCTCTTCTT GTTGCATTGA 000800 000801 TCCCTTTACC ATTATGCAAT GCACTTCTTT GTCTCTTTTG TCTTTTTTGA TCTTTGTTGG TTTAAAGTAT TTTATCAGAG 000880 000881 ACTAGGATTG CAACCCCTGC TTTTTTTTTT TTT |
Predicted Small Protein
Name | NONHSAT032707_smProtein_410:502 |
Length | 31 |
Molecular weight | 3422.1272 |
Aromaticity | 0.166666666667 |
Instability index | 49.61 |
Isoelectric point | 6.49395751953 |
Runs | 5 |
Runs residual | 0.0355855855856 |
Runs probability | 0.0290231407879 |
Amino acid sequence | MVELIYAPTNSVKAFLFLHILSSICCFLTF |
Secondary structure | LEEEEELLLLHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTi |