NONHSAT032838
Revision as of 21:20, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT032838 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
786 nt |
Genomic location |
chr13-:31626380..31630757 |
Exon number |
3 |
Exons |
31626380..31626484,31627363..31627587,31630302..31630757 |
Genome context |
|
Sequence |
000001 CAGCTGCAGA GCTAGCCAGA GGCCCCAGCT CTGCTCCATC AGCAGAAGGA CAGCTGTCTT TGAGGGCGGG ACGAGGACCC 000080
000081 CCACCTCGCA GGGGTCATGG CAGACTGCTT TGTGACAAGG CCGTTGGGGG ACAAATGGAC CTGACGTTCT CCAGAAACCA 000160 000161 GGCTTCAGTC TTTGAGCTGC ACTCCTCTTC CTTCAAAATC GTGGCAAGGA GACGCCTATT CCCCCGGTGT ACTCATGGAC 000240 000241 CAGCGAGAGC CACTGACAGA TGCATCACTG GATCCTAACT AAACACTTTG TTCCATCTCC CTGTGACCAG AGTATTGTAC 000320 000321 CACAATCCCA GTTGTTTGCA ATAAATGGCT TGTCTTGATT TTCCAGATTA TAGCTAGAAG ATTGCCTCAA ACGATGAATT 000400 000401 GTAGAATGGA GCAGGATGTC TGTGTGTCTG CGTCTTCACC CGGGTTTTTC AGGCCACTGT GTCTGTGAAC TTAGCTCTAT 000480 000481 GAAAGCAAGA AGCCTATGAG AATTCCGCCA GGGGCAAGCC TGGCCTTGGC GCTTCACTGT CTTAGCGTGT GTCTGGCCCT 000560 000561 CCCATTCCTG GCCAAGGCCC ACAGCCACCA CAGATGACCT GCTGATGCCT CTGCTGAAAT CCGTGGCCAC TGGCCAACAG 000640 000641 CTTGACAAGA GTGTCAGCTC CCTCCCGAGA CGAAATCAGA GGAAAACGCC TCTAGTTTCT AAGAAGCACA CAGGGAGCCA 000720 000721 CTTCTTTACC GCTAGCTCCT GCAGGATCTG TGGGATCCTG CAGGTGCTGG TTTGCCTCCT GAGCCC |
Predicted Small Protein
Name | NONHSAT032838_smProtein_134:277 |
Length | 48 |
Molecular weight | 5325.0377 |
Aromaticity | 0.0851063829787 |
Instability index | 51.2021276596 |
Isoelectric point | 11.2534790039 |
Runs | 8 |
Runs residual | 0.00393617021277 |
Runs probability | 0.0254261614556 |
Amino acid sequence | MDLTFSRNQASVFELHSSSFKIVARRRLFPRCTHGPARATDRCITGS |
Secondary structure | LLLLEELLLLLEEEELLLLEEEEHHHHLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |