NONHSAT032838

From LncRNAWiki
Revision as of 21:20, 16 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT032838

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

786 nt

Genomic location

chr13-:31626380..31630757

Exon number

3

Exons

31626380..31626484,31627363..31627587,31630302..31630757

Genome context

Sequence
000001 CAGCTGCAGA GCTAGCCAGA GGCCCCAGCT CTGCTCCATC AGCAGAAGGA CAGCTGTCTT TGAGGGCGGG ACGAGGACCC 000080
000081 CCACCTCGCA GGGGTCATGG CAGACTGCTT TGTGACAAGG CCGTTGGGGG ACAAATGGAC CTGACGTTCT CCAGAAACCA 000160
000161 GGCTTCAGTC TTTGAGCTGC ACTCCTCTTC CTTCAAAATC GTGGCAAGGA GACGCCTATT CCCCCGGTGT ACTCATGGAC 000240
000241 CAGCGAGAGC CACTGACAGA TGCATCACTG GATCCTAACT AAACACTTTG TTCCATCTCC CTGTGACCAG AGTATTGTAC 000320
000321 CACAATCCCA GTTGTTTGCA ATAAATGGCT TGTCTTGATT TTCCAGATTA TAGCTAGAAG ATTGCCTCAA ACGATGAATT 000400
000401 GTAGAATGGA GCAGGATGTC TGTGTGTCTG CGTCTTCACC CGGGTTTTTC AGGCCACTGT GTCTGTGAAC TTAGCTCTAT 000480
000481 GAAAGCAAGA AGCCTATGAG AATTCCGCCA GGGGCAAGCC TGGCCTTGGC GCTTCACTGT CTTAGCGTGT GTCTGGCCCT 000560
000561 CCCATTCCTG GCCAAGGCCC ACAGCCACCA CAGATGACCT GCTGATGCCT CTGCTGAAAT CCGTGGCCAC TGGCCAACAG 000640
000641 CTTGACAAGA GTGTCAGCTC CCTCCCGAGA CGAAATCAGA GGAAAACGCC TCTAGTTTCT AAGAAGCACA CAGGGAGCCA 000720
000721 CTTCTTTACC GCTAGCTCCT GCAGGATCTG TGGGATCCTG CAGGTGCTGG TTTGCCTCCT GAGCCC
[back to top]

Predicted Small Protein

Name NONHSAT032838_smProtein_134:277
Length 48
Molecular weight 5325.0377
Aromaticity 0.0851063829787
Instability index 51.2021276596
Isoelectric point 11.2534790039
Runs 8
Runs residual 0.00393617021277
Runs probability 0.0254261614556
Amino acid sequence MDLTFSRNQASVFELHSSSFKIVARRRLFPRCTHGPARATDRCITGS
Secondary structure LLLLEELLLLLEEEELLLLEEEEHHHHLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -