NONHSAT033292
Revision as of 21:21, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT033292 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
576 nt |
Genomic location |
chr13-:39603169..39611431 |
Exon number |
4 |
Exons |
39603169..39603512,39605700..39605768,39608268..39608333,39611335..39611431 |
Genome context |
|
Sequence |
000001 GTCTTTTAAT TGCAAGTATA ACTGTTAAAA CCACGTCGGG ATAGTAGTCA AGATGGATAA AAAGTCCTTT GAAATGGTGC 000080
000081 TGGATGAAAT TAGAAAGGCT GTTTTGACAG AATACAAATT AAAAGCAATT GAATATGTGC ATGGATACTT TTCTAGTGAA 000160 000161 CAGGTGGTTG ATTTGCTGAG ATATTTTTCC TGGGCCGAGC CCCAGTTGAA GGCAATGAAA GCATTACAGC ATAAAATGGT 000240 000241 GGCTGTCCAG CCAACAGAAG TGGTCAATAT ACTCAACTGT TTCACTTTCA GTAAAGACAA ACTAGTTGCT CTTGAACTGT 000320 000321 TAGCCTCGTA AGTAtttctt tttttttttt tttttttttt ACTTGGGAAA AAATGTAGAA GCGTTTTAAG TGTCTAATTA 000400 000401 GTGTGTGTTA ATGTGTCTAA CAAAATACAG TCAAAAGCAT AGTGGTACAT TCTGATTTCC AAATGTGAAT AAGTATCTAG 000480 000481 TGTACTTATT ACATATATGA CTATAACTTA TAAAATGAAG GGGCTTAACA AGATTGTTTA ATTTGATTTT TTGTATTTCA 000560 000561 GTTATTTGCT TTGCCT |
Predicted Small Protein
Name | NONHSAT033292_smProtein_134:178 |
Length | 15 |
Molecular weight | 1745.1602 |
Aromaticity | 0.142857142857 |
Instability index | 80.3785714286 |
Isoelectric point | 5.58306884766 |
Runs | 5 |
Runs residual | 1.66533453694e-16 |
Runs probability | 0.00692457163044 |
Amino acid sequence | MCMDTFLVNRWLIC |
Secondary structure | LLLLHHHHLLLEEL |
PRMN | - |
PiMo | - |