NONHSAT033292

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT033292

Source

NONCODE4.0

Same with

,

Classification

sense

Length

576 nt

Genomic location

chr13-:39603169..39611431

Exon number

4

Exons

39603169..39603512,39605700..39605768,39608268..39608333,39611335..39611431

Genome context

Sequence
000001 GTCTTTTAAT TGCAAGTATA ACTGTTAAAA CCACGTCGGG ATAGTAGTCA AGATGGATAA AAAGTCCTTT GAAATGGTGC 000080
000081 TGGATGAAAT TAGAAAGGCT GTTTTGACAG AATACAAATT AAAAGCAATT GAATATGTGC ATGGATACTT TTCTAGTGAA 000160
000161 CAGGTGGTTG ATTTGCTGAG ATATTTTTCC TGGGCCGAGC CCCAGTTGAA GGCAATGAAA GCATTACAGC ATAAAATGGT 000240
000241 GGCTGTCCAG CCAACAGAAG TGGTCAATAT ACTCAACTGT TTCACTTTCA GTAAAGACAA ACTAGTTGCT CTTGAACTGT 000320
000321 TAGCCTCGTA AGTAtttctt tttttttttt tttttttttt ACTTGGGAAA AAATGTAGAA GCGTTTTAAG TGTCTAATTA 000400
000401 GTGTGTGTTA ATGTGTCTAA CAAAATACAG TCAAAAGCAT AGTGGTACAT TCTGATTTCC AAATGTGAAT AAGTATCTAG 000480
000481 TGTACTTATT ACATATATGA CTATAACTTA TAAAATGAAG GGGCTTAACA AGATTGTTTA ATTTGATTTT TTGTATTTCA 000560
000561 GTTATTTGCT TTGCCT
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Predicted Small Protein

Name NONHSAT033292_smProtein_134:178
Length 15
Molecular weight 1745.1602
Aromaticity 0.142857142857
Instability index 80.3785714286
Isoelectric point 5.58306884766
Runs 5
Runs residual 1.66533453694e-16
Runs probability 0.00692457163044
Amino acid sequence MCMDTFLVNRWLIC
Secondary structure LLLLHHHHLLLEEL
PRMN -
PiMo -