NONHSAT033416

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT033416

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1168 nt

Genomic location

chr13-:42207141..42208291

Exon number

1

Exons

42207141..42208291

Genome context

Sequence
000001 GTTCTCTCCT CTCCCCTCTG TATGATTCTC AGCATTGCCT GCTGACCAAG CCACGGCACC CATGGCCAAA CATACACAAC 000080
000081 TTCATGTCTC AAAGTTTGTG CTGCCTAAAG CCCTCAACCT CCCAAGACAG GCACTGCTAA GGGAATTCTC AGATGGGGCA 000160
000161 CAAAGGGAGA TAAGTGGGAG GGGTATAGGG AGAAAGAGGG AGCCACAGGA AGCAGAGGCA GGGGAACTTG TTGGAATGGC 000240
000241 ATCCAGGACT CTAGTCTTTT TAGGAGTAAG AATTTCAAGG TATAAGTGGG AAACAAACAG ATTTACATGG TTAAAGAAAA 000320
000321 TGGAGAACTA ACACAAAGGA GGAAATGACC AACCCACCTA TGTTCGATTG TAGAAACCCC TGATTAATTA CAGTCATTAT 000400
000401 GTGAATTGTT TGTGTGTTTC TGATTACCAT GCAGCTCAAT ATCAGTGATA TATAATGTAA ATATATATCA GATCAGCTGT 000480
000481 GCCCTAAATT TAATTAGAAA GCTTTACCAA CCGATATTTA GTATTCTTAA TTTGTCGCTC ACATCGTAAG AGCCTTCACA 000560
000561 ACCTAAAATT AAAAGAATGT TTCAAAAAGT GAATTCCAAT GGTATTCTTT TCTCCTACCC CAAAGTTCCT GCTTTCTTTC 000640
000641 TAACTTGCCC CCATAAGTTC CAGGAGAGCA GTTATCAGGC TTCCCTATGT TATTGGTGGC TTATATACCA CTGCGGTCAT 000720
000721 TCTGTGGCTT TGACACAGCC GCAGTGGCAA TGGCCATGCA GTCATTCATT TAGTCACTAG ATATTTCCTG AGCTTCTGTG 000800
000801 ATGTACCAAG ACTGTGCCTG GTGCTGAAGA TGTTAGGAAG AATAAGATTC AGTCCCTTCC CTCCAGATGT TTACACCTAG 000880
000881 AATCCATACC AGCTTATATA TCTAGCCACA TCTTCCTACA TACCCCATAC CACTGATTCA TTGCAATGCT ATTTATCCCT 000960
000961 GAAATATTTC TTCAAAAAAT GTATATGTGT GGATGTATAT ATACATATGC ACATACATAA ATGTACTATC ATAAAAGAGT 001040
001041 ACATTACGAT TACTTCATGT GTCAAGTTTT CCCATGCTCC AAGTGCTGTT TCATACTCTG TATTGGAGCC AGCGCAGCAA 001120
001121 CCTGGAAGGT TCCCTCACAC AGAGCCTCAG TAAACCCATG GAACACAC
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Predicted Small Protein

Name NONHSAT033416_smProtein_686:772
Length 29
Molecular weight 3067.7076
Aromaticity 0.142857142857
Instability index 47.6321428571
Isoelectric point 5.58514404297
Runs 5
Runs residual 0.0246478873239
Runs probability 0.0509803921569
Amino acid sequence MLLVAYIPLRSFCGFDTAAVAMAMQSFI
Secondary structure LEEEEELLLLLLLLHHHHHHHHHHHHHL
PRMN LLLLLLLLLLHHHHHHHHHHHHHHHHHH
PiMo i???????????????????????????