NONHSAT033544
Revision as of 21:22, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT033544 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
747 nt |
Genomic location |
chr13-:45694000..45695288 |
Exon number |
2 |
Exons |
45694000..45694051,45694594..45695288 |
Genome context |
|
Sequence |
000001 TAAGAGTAGG CAGGGACCAG TCCTACTTTC TGGCCGAGAA AACTGTACAG AAAGTAGACA TTCAACTACC TCACGCAGGC 000080
000081 TCATGGCTAA AACCAGTTTC ACCAAGGGAA GATACAAGGA ATTCTTCAGT CTGGGATAAA ATGCACCGTC CAAATCTGGG 000160 000161 GACACCAAGA CAAGATTCCA GGAAAGCCGT GAGAAAGAGA TCTAGTCCAG GCAGATTCAG AGTAGTAACT GGCTGAAAGA 000240 000241 CACTTTGCGT CCCTAAACTA ATTCCTCGTC TGCAAACAGA TACAACAATG ACTCCTGCCT CTCAAAATGT GTGAAGCTCT 000320 000321 AACGAGATAG CCGTAAAAGA ACTTTAAGAG GCGCACGGAG CGGGATAGGC TCAAGTTACT TAAACTATAC TTGTGTTAGG 000400 000401 AGGAGCGCAA GTGGGAGACT CGCGAACATT ACCTTGACTA GCCACACTCC TGTGTTCTGT TTGGCGCCGG TCAAGTCGAG 000480 000481 TTCCCCGCGC TCGGCCATGG GTCTGCAGCC GGTGGAGGCG TGCGGGATGC AGCAGCGACC CCAGGAGCCG CAGGGCTGAG 000560 000561 GAGCGGGCGT CCGGAACAAA GGACAAGCCG CGCTGAGAGG CGAAGAGCCG GCGTTCCTTA CCTGCCAGAA CACTGGGAAC 000640 000641 CGAGGAAAAG AGGAACACGC CGCCAGGAGC CGGGACTGCG CCTGCGCACT GCTACAATAA AGTTCAATCC TCCTGCTTCA 000720 000721 ACTGGGCcct ctcaatttca tctcttt |
Predicted Small Protein
Name | NONHSAT033544_smProtein_140:235 |
Length | 32 |
Molecular weight | 3548.0558 |
Aromaticity | 0.0322580645161 |
Instability index | 93.6483870968 |
Isoelectric point | 12.4003295898 |
Runs | 6 |
Runs residual | 0.00772849462366 |
Runs probability | 0.0272919978802 |
Amino acid sequence | MHRPNLGTPRQDSRKAVRKRSSPGRFRVVTG |
Secondary structure | LLLLLLLLLLLLLHHHHEELLLLLLEEEELL |
PRMN | - |
PiMo | - |