NONHSAT034243
Revision as of 21:26, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034243 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
823 nt |
Genomic location |
chr13+:69885464..69896233 |
Exon number |
2 |
Exons |
69885464..69885528,69895476..69896233 |
Genome context |
|
Sequence |
000001 CAGATTCACA GTTTCTGAAA GGACCATGGA CTAATTGGAT CACAAGCAAA CTGAAACATT ACAGGgaaat aatgctgcaa 000080
000081 Agccgggcat agtgacatgc acctggagtc ccagctactt gggaggctga ggcaggagga ttgcttgagc ccaggagttc 000160 000161 aaagttgcag tgcactatca tggcacctgc gaagagccac tgcactcgca ctctagccag gggagcatag tgacacttca 000240 000241 tctattacaa aaaaTTATAT AAAAATTATA AAAAGAGAGA ATACTGAATG AATATATATA TATATATAGC CTTTGTAAAT 000320 000321 TTTTCTTTAG CTTATCTACC CAGGTGTTTG CATTATTTTA CCAAATAATA GAATTCACAT AAATATGCAG AGTTTTCAAA 000400 000401 GAGACTGTAT TGAAGTTAAT GCTTGTGTAC ATTATTATTT AGTGAAAAGT TAAAAATGAT GGCATAATGT TTTGTTTCAT 000480 000481 TTTCCCATGT TAATAGTAAG GTATACCCAG AGTACATTTC TTATTAAGAA AAAAAAAGAT TGGGGTCACC TTGATCAAAA 000560 000561 ATTACCTGTA TACTAGTTCA GATATATTAT ATATGAACTA CAGTTTAAGA AATATCATCA AATATTATTA ATATATTCTA 000640 000641 CTATCTAAAA ATTCTGCTAT AGCATTATAT TTTATGGCTA AAAAAGCTTG ATACTGGTTG TTACAGTAAA TCTTTACTAA 000720 000721 TTTATGAAGC ATCAAATTCA GATTTTTAAA AATTATGTCA AGCTCAAGCT ATTTAGAATT CAGCATAGTT TTATATACTA 000800 000801 CATAAGAAGA AAACAGCtta aaa |
Predicted Small Protein
Name | NONHSAT034243_smProtein_287:367 |
Length | 27 |
Molecular weight | 3201.7997 |
Aromaticity | 0.269230769231 |
Instability index | 49.55 |
Isoelectric point | 9.03485107422 |
Runs | 4 |
Runs residual | 0.0554561717352 |
Runs probability | 0.00560854972619 |
Amino acid sequence | MNIYIYIAFVNFSLAYLPRCLHYFTK |
Secondary structure | LLEEEEHHHHHHHHHHHHHHHHHHLL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | i????????????????????????? |